Pairwise Alignments

Query, 653 a.a., DNA mismatch repair protein MutL from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., DNA mismatch repair endonuclease MutL from Rahnella sp. WP5

 Score =  572 bits (1475), Expect = e-167
 Identities = 323/635 (50%), Positives = 414/635 (65%), Gaps = 33/635 (5%)

Query: 1   MTIRILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDLEKGGAKLIRIRDNG 60
           M I++LP +LANQIAAGEVVERPASVVKELVENSLDAGATRIDID+++GGAKLIRIRDNG
Sbjct: 1   MPIKVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIDRGGAKLIRIRDNG 60

Query: 61  SGIDKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRTVAQEEA 120
            GI KD+L LAL+RHATSKI  LDDLEAI+SLGFRGEALASISSVSRL LTSRT  Q EA
Sbjct: 61  CGIGKDDLALALARHATSKITCLDDLEAILSLGFRGEALASISSVSRLILTSRTAEQNEA 120

Query: 121 WSAYSEGRDMAVKLQPAAHPVGTTVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIAL 180
           W AY+EGRDMAV ++PAAHP G+TVEVLDLF+NTPARRKF+RTEKTEFTHIDE+++RIAL
Sbjct: 121 WQAYAEGRDMAVTVKPAAHPQGSTVEVLDLFYNTPARRKFMRTEKTEFTHIDEVVRRIAL 180

Query: 181 SRFDVSFTLRHNGKIVRQYRAATTLPQQEKRLAAVCGNPFVQHMLRIELEHQGLKLHGWI 240
           +RFDVS  L HNGK++RQYRA     Q  +RLA++C   FV+H L +E  H  L + GW+
Sbjct: 181 ARFDVSVNLSHNGKLIRQYRAVKDRSQFSRRLASICSPAFVEHALEVEWSHGDLAIRGWV 240

Query: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRVDQFATYVLFIELDPHQVDV 300
             P G+R  +D+QYCYVN RMM+D+LINHAIRQ+Y+  L+ DQ   YVL++++DPHQVDV
Sbjct: 241 ADPAGSRSLTDMQYCYVNNRMMKDRLINHAIRQAYQDQLKDDQQPAYVLYLDVDPHQVDV 300

Query: 301 NVHPAKHEVRFHQARLVHDFIYQALSSALVQGAQVMAPTINEGAFHLPHCAEEVNPPVVP 360
           NVHPAKHEVRFHQ+RLVHDFIYQA+ S L Q     AP ++E     P   E+       
Sbjct: 301 NVHPAKHEVRFHQSRLVHDFIYQAVMSVLQQAG---APVLDE-----PQLQEDT------ 346

Query: 361 MIDTTQQERVWQAVQNTPDYP--RKAPRDNDRDESDNPQVRERA-VSNPWVASPKTASTG 417
                QQE    A  N    P  RK P   + +        E A  S P     ++A   
Sbjct: 347 --PRWQQENRQAAGGNHFSQPAERKVPASRENNSPRENVFPETARASQP----RESAYRS 400

Query: 418 KERYGSASVSKKEAAVYQTLMQTPDLSDEEPSTASTIVSSIEAVK--ANIAIE----KLG 471
            E   + S SK    + Q   ++  L +  P+ A     ++   +     A+E      G
Sbjct: 401 TEPAYNPSESKAYGRLLQPAPESFSLQEPAPAVAQPAKPAVSVARTLTEPALESHSQSFG 460

Query: 472 KAIQVVAGQYLLMSSPQGCVLISLYQAQQLKLRGLLNAQHGALKAQPLLVPLALKLNESE 531
           + + V + +Y L+   +  VL++L  A +      L      L+ QPLL+PL L + + E
Sbjct: 461 RVLTVCSAEYALLERGKQLVLLALPVADRWLKWAQLTPPEEGLRPQPLLIPLKLTMQKEE 520

Query: 532 WQVAQRHSSALLQLGIELKSRTNHSIMVMAVPQPLRQQNLQQLLPDLLSYAASCSESQAL 591
             V  RH + L   G+E+ S +   + V AVP PLRQQNLQ+L+PDLL Y A     Q +
Sbjct: 521 TAVLARHQALLQHFGLEMLSESQR-VTVRAVPLPLRQQNLQKLIPDLLGYLA---VQQEV 576

Query: 592 SHQALADWLTQRIVVEKRDYTLAEAIGLIAELEQL 626
           +  A+A W  +    E   +T+++AI L+ ++E+L
Sbjct: 577 TSDAVAMWFARHCGCEHEVWTISQAIQLLTDVERL 611