Pairwise Alignments

Query, 653 a.a., DNA mismatch repair protein MutL from Vibrio cholerae E7946 ATCC 55056

Subject, 631 a.a., DNA mismatch repair protein MutL (RefSeq) from Shewanella loihica PV-4

 Score =  493 bits (1269), Expect = e-143
 Identities = 292/615 (47%), Positives = 388/615 (63%), Gaps = 41/615 (6%)

Query: 1   MTIRILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDLEKGGAKLIRIRDNG 60
           MTIRILP +LANQIAAGEVVERPASV+KELVENSLDAGATR+DI+++KGG+KLI+I DNG
Sbjct: 1   MTIRILPPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIEIDKGGSKLIKITDNG 60

Query: 61  SGIDKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRTVAQEEA 120
           SGI K+EL LALSRHATSK+ +LDDL+AI+S GFRGEALASISSVSRLTLTSRT  Q EA
Sbjct: 61  SGIPKEELSLALSRHATSKLASLDDLDAILSFGFRGEALASISSVSRLTLTSRTQEQSEA 120

Query: 121 WSAYSEGRDMAVKLQPAAHPVGTTVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIAL 180
           W AY+EG +MAV++ PAAHPVG+TVE  DLFFNTPARR+FL+++KTEFTHIDE LKRIAL
Sbjct: 121 WQAYAEGSEMAVRVIPAAHPVGSTVEAADLFFNTPARRRFLKSDKTEFTHIDEWLKRIAL 180

Query: 181 SRFDVSFTLRHNGKIVRQYRAATTLPQQEKRLAAVCGNPFVQHMLRIELEHQGLKLHGWI 240
            R ++ FTL+HNGK VR YR A T  Q  +RLA V G  F  + LR++  H GL L G+I
Sbjct: 181 VRSEIHFTLKHNGKQVRNYRPAKTEAQYLQRLAQVSGKAFADNALRVDCNHNGLSLSGYI 240

Query: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRVDQFATYVLFIELDPHQVDV 300
            +P       D QY YVNGR++RD+L+NHA+RQ++   L+ +Q A +VL + LDPHQVDV
Sbjct: 241 QSPFSEMAVGDTQYFYVNGRLVRDRLVNHAVRQAFAQQLQGEQVA-FVLMLNLDPHQVDV 299

Query: 301 NVHPAKHEVRFHQARLVHDFIYQALSSALVQGAQV-MAPTINEGAFHLPHCAEEVNPPVV 359
           NVHPAKHEVRFH++R VHDFI QAL SAL Q +++     ++         A  + P   
Sbjct: 300 NVHPAKHEVRFHESRYVHDFILQALESALRQSSELAFEAALDTQVTDQNRSASYIRPLQT 359

Query: 360 PMIDT---------TQQERVWQAVQNTPDYPRKAPRDNDRDESDNPQVRERAVSNPWVAS 410
              DT         T++  +W A +      R+A R     ++   +V+E  +S+    S
Sbjct: 360 QQSDTGSNQIAHGDTEENALWLANERPAYGEREASR-----QAGGQRVQETQMSS--YGS 412

Query: 411 PKTASTGKERYGSASVSKKEAAVYQTLMQTPDLSDEEPSTASTIVSSIEAVKANIAIEK- 469
            ++   G+    +   S+     Y  LM TP +S +                AN A +  
Sbjct: 413 GQSGGRGRSYASTELPSQAAVDSYAQLMTTPGVSSQ----------------ANQADDSH 456

Query: 470 LGKAIQVVAGQYLLMSSPQGCVLISLYQAQQLKLRGLLNAQHGA-LKAQPLLVPLALKLN 528
           L    QV+ GQY L+       L+SL  A +   R  + A+  A L  QPLL+P+++K++
Sbjct: 457 LPPMPQVLDGQYWLLVRGSELALLSLSCAAREVTRREIEAKLDAGLIGQPLLMPVSVKVD 516

Query: 529 ESEWQVAQRHSSALLQLGIELKSRTNHSIMVMAVPQPLRQQNLQQLLPDLLSYAASCSES 588
           E   Q        + +LG+EL  R    +++  VP  LRQ  L  ++P+ L +       
Sbjct: 517 EDWQQTLVERELLVRKLGLELTIRLG-QLIIKKVPPYLRQSQLASVIPEFLQWI----RF 571

Query: 589 QALSHQALADWLTQR 603
           +  + +AL +WL  +
Sbjct: 572 EEPTTEALVNWLVNQ 586