Pairwise Alignments

Query, 653 a.a., DNA mismatch repair protein MutL from Vibrio cholerae E7946 ATCC 55056

Subject, 631 a.a., DNA mismatch repair protein MutL (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  484 bits (1245), Expect = e-141
 Identities = 284/615 (46%), Positives = 389/615 (63%), Gaps = 41/615 (6%)

Query: 1   MTIRILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDLEKGGAKLIRIRDNG 60
           M I+ILP +LANQIAAGEVVERPASVVKELVENSLDAGA+RIDI+++KGG+KLI+IRDNG
Sbjct: 1   MGIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRIDIEIDKGGSKLIKIRDNG 60

Query: 61  SGIDKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRTVAQEEA 120
           SGI K+EL LALSRHATSK+H+LDDLEAI+S GFRGEALASISSVSRLTLTSRT  Q EA
Sbjct: 61  SGIPKEELALALSRHATSKLHSLDDLEAILSFGFRGEALASISSVSRLTLTSRTAEQSEA 120

Query: 121 WSAYSEGRDMAVKLQPAAHPVGTTVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIAL 180
           W AY+EG +MAVK+ PAAHPVG+T+EV+DLFFNTPARR+FL+++KTEFTHIDE LKRIAL
Sbjct: 121 WQAYAEGVEMAVKVMPAAHPVGSTIEVVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIAL 180

Query: 181 SRFDVSFTLRHNGKIVRQYRAATTLPQQEKRLAAVCGNPFVQHMLRIELEHQGLKLHGWI 240
            R D+ FTL HNGK VR YR A   PQ  +RL  V G PF    LR+E +H  L+L G++
Sbjct: 181 VRGDIHFTLTHNGKTVRNYRPAMNEPQYLQRLTQVAGRPFADEALRVECQHDDLRLSGYL 240

Query: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRVDQFATYVLFIELDPHQVDV 300
            +P  +   +D  Y YVNGR++RD+L+NHA+RQ++     V+Q   YVL +++DPHQVDV
Sbjct: 241 QSP-WSTVLTDTHYFYVNGRLVRDRLVNHAVRQAFAQKAEVEQ-PGYVLMLDIDPHQVDV 298

Query: 301 NVHPAKHEVRFHQARLVHDFIYQALSSALVQGAQVM----APTINEGAFHLPHCAEEVNP 356
           NVHPAKHEVRFHQ+R VHD+I QAL SAL +  ++     +P I++ +   P+   E   
Sbjct: 299 NVHPAKHEVRFHQSRYVHDYILQALQSALEEAGELRFEPHSPQIDDSS---PYVKPETES 355

Query: 357 PVVPMIDTTQQERVWQAVQNTPDYPRKAPRDNDRDESDNPQVRERAV--SNPWVA----- 409
                + +T+    +  +  T +   +A R  +   SD P++R      SN + +     
Sbjct: 356 SAFE-LQSTESNAKYLGIDTTGERQAEA-RVVEYRSSDMPKMRTGTAVQSNAFGSMSVPR 413

Query: 410 SPKTASTGKERYGSASVSKKEAAVYQTLMQTPDLSDEEPSTASTIVSSIEAVKANIAIEK 469
             ++ S+G+ R  +   SK   A Y  L+QTP  S ++ +   T+               
Sbjct: 414 ETRSGSSGESRPRAELPSKTAIASYGALLQTPSYSVQDKAYQPTLPMP------------ 461

Query: 470 LGKAIQVVAGQYLLMSSPQGCVLISLYQ-AQQLKLRGLLNAQHGALKAQPLLVPLALKLN 528
                 ++ GQ+ + +      L+ +   A   +   +       L  QPLL+P+++  +
Sbjct: 462 -----SILDGQFWVFTDGPKLSLLRIESVALATRSDEIETKLATGLIGQPLLMPVSVAAD 516

Query: 529 ESEWQVAQRHSSALLQLGIELKSRTNHSIMVMAVPQPLRQQNLQQLLPDLLSYAASCSES 588
                +   H++ + QLG+EL  R    +++  VP  LR   L +++P+ L         
Sbjct: 517 TDWSSLLDEHATLIRQLGLELTIR-YQQLIIKKVPPYLRDCQLARVIPEWL----QSLRF 571

Query: 589 QALSHQALADWLTQR 603
           +A +  ALA WL ++
Sbjct: 572 EAPAPNALAIWLAEQ 586