Pairwise Alignments

Query, 653 a.a., DNA mismatch repair protein MutL from Vibrio cholerae E7946 ATCC 55056

Subject, 641 a.a., DNA mismatch repair protein from Herbaspirillum seropedicae SmR1

 Score =  348 bits (894), Expect = e-100
 Identities = 233/637 (36%), Positives = 342/637 (53%), Gaps = 62/637 (9%)

Query: 3   IRILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDLEKGGAKLIRIRDNGSG 62
           I+ LP +L +QIAAGEV+ERP++VVKEL+EN+LDAG+T+I + LE+GG K I I DNG G
Sbjct: 21  IQALPDQLISQIAAGEVIERPSAVVKELLENALDAGSTQITVRLEQGGVKRIAITDNGRG 80

Query: 63  IDKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRTVAQEEAWS 122
           I  ++L LAL+RHATSKI +L DLE + +LGFRGEALASI+SV++LT+TSRT     AW 
Sbjct: 81  IPPEQLPLALARHATSKIASLTDLENVSTLGFRGEALASIASVAQLTVTSRTADAPHAWE 140

Query: 123 AYSEGRDMAVKLQPAAHPVGTTVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIALSR 182
               G      + PA+   GTT++V DL+FNTPARRKFL++E+TE+ H  E+++RIAL+R
Sbjct: 141 I--TGSQFGT-VAPASGAQGTTIDVQDLYFNTPARRKFLKSEQTEYGHCAEVVRRIALAR 197

Query: 183 FDVSFTLRHNGKIVRQYRAATTLPQQEKRLAAVCGNPFVQHMLRIELEHQGLKLHGWITT 242
            DVSF+L HNGK V  +       +  KR A + G+ F    L ++     L+LHG++  
Sbjct: 198 PDVSFSLSHNGKTVDHWNVG----EFAKRSAHILGDEFANARLPLDESAGPLRLHGFVGL 253

Query: 243 PEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRVDQFATYVLFIELDPHQVDVNV 302
           P  ++ ++D QY YVNGR +RDKL+ HA+R +Y+  L  D++  Y L + LDP  VDVNV
Sbjct: 254 PTASKARADGQYFYVNGRFVRDKLLTHAVRAAYQDVLHGDRYPAYALSLTLDPALVDVNV 313

Query: 303 HPAKHEVRFHQARLVHDFIYQALSSALVQGAQV-------MAPTINEGAFHLPHCAEEVN 355
           HP+K EVRF  +R VH F++ A+S AL Q + V        AP  ++ A   P  A   N
Sbjct: 314 HPSKIEVRFRDSRAVHQFVFHAVSRALAQTSAVSFGNLPGAAPQSDDSAGAPPPAA---N 370

Query: 356 PPVVPMIDTTQQERVWQAVQNTPDYPRKAPRDNDRDESDNPQVRERAVSNPWVASPKTAS 415
            P +P I   QQ+                                 + S  +  +P+  S
Sbjct: 371 AP-LPWIGEQQQQ---------------------------------SFSAQFAEAPRPFS 396

Query: 416 TGKERYGSASVSKKEAAVYQTLMQTPDLSDEEPSTASTIVSSIEAVKANIAIE---KLGK 472
            G     S    ++    Y ++ ++   S E   +A     +  A       E    LG 
Sbjct: 397 FGG---NSGFGVRQNTEAYGSMFRSAPTSGEPDGSAPAAYGATPAAAPAALPEGDFPLGF 453

Query: 473 AIQVVAGQYLLMSSPQGCVLISLYQA-QQLKLRGLLNAQHG-ALKAQPLLVPLALKLNES 530
           A+  + G Y+L  +  G V++ ++ A +++    L  A  G  +  QPLL+P+    +  
Sbjct: 454 ALAQLHGIYVLAQNQAGLVVVDMHAAHERILYEQLKTALDGNEMFVQPLLIPVTFYADPV 513

Query: 531 EWQVAQRHSSALLQLGIELKSRTNHSIMVMAVPQPLRQQNLQQLLPDLLSYAASCSESQA 590
           E    + H   L  LG ++   +  ++ V AVP  L+  + Q L  D+L        S+ 
Sbjct: 514 EVGTVEEHQETLSALGFDIAVMSPTTLAVRAVPALLKNADAQTLARDVLRDVREYGGSRV 573

Query: 591 L---SHQALADWLTQRIVVEKRDYTLAEAIGLIAELE 624
           L    ++ L        V   R  TL E   L+ ++E
Sbjct: 574 LLERRNELLGTLACHTAVRANRSLTLPEMNALLRQME 610