Pairwise Alignments

Query, 653 a.a., DNA mismatch repair protein MutL from Vibrio cholerae E7946 ATCC 55056

Subject, 648 a.a., DNA mismatch repair protein (RefSeq) from Shewanella sp. ANA-3

 Score =  486 bits (1250), Expect = e-141
 Identities = 290/633 (45%), Positives = 384/633 (60%), Gaps = 60/633 (9%)

Query: 1   MTIRILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDLEKGGAKLIRIRDNG 60
           M I+ILP +LANQIAAGEVVERPASVVKELVENSLDAGATRIDI+++KGG+KLI+IRDNG
Sbjct: 1   MGIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIDKGGSKLIKIRDNG 60

Query: 61  SGIDKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRTVAQEEA 120
           SGI KDEL LALSRHATSK+H+LDDLEAI+S GFRGEALASISSVSRLTLTSRT  Q EA
Sbjct: 61  SGIPKDELALALSRHATSKLHSLDDLEAILSFGFRGEALASISSVSRLTLTSRTAEQTEA 120

Query: 121 WSAYSEGRDMAVKLQPAAHPVGTTVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIAL 180
           W AY+EG DMAVK+ PAAHPVG+T+EV+DLFFNTPARR+FL+++KTEFTHIDE LKRIAL
Sbjct: 121 WQAYAEGADMAVKVMPAAHPVGSTIEVVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIAL 180

Query: 181 SRFDVSFTLRHNGKIVRQYRAATTLPQQEKRLAAVCGNPFVQHMLRIELEHQGLKLHGWI 240
            R D+ FTL HNGKIVR  R A   PQ  +RL  V G  F    LR+E +H  L+L G++
Sbjct: 181 VRGDIHFTLTHNGKIVRNCRPAMNEPQYLQRLTQVAGRQFADEALRVECQHDDLRLSGYL 240

Query: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRVDQFATYVLFIELDPHQVDV 300
            +P  +   +D  Y YVNGR++RD+L+NHA+RQ++     V+Q   YVL +++DPHQVDV
Sbjct: 241 QSP-WSTVLTDTHYFYVNGRLVRDRLVNHAVRQAFAQKAEVEQ-PGYVLMLDIDPHQVDV 298

Query: 301 NVHPAKHEVRFHQARLVHDFIYQALSSALVQGAQV--------MAPTINEGA-------- 344
           NVHPAKHEVRFHQ+R VHD+I QAL SAL +  ++         +P I + A        
Sbjct: 299 NVHPAKHEVRFHQSRYVHDYILQALQSALEEAGELGFERPFEPSSPQIRDEASLSETGAQ 358

Query: 345 FHLPHCAEEVNPPVVPMIDTTQQERVWQAVQNTPDYPRKAPRDNDRDESDNPQVRERAVS 404
               H A E+  P       ++    W           +  R++  D     + R+ A +
Sbjct: 359 TQTEHHAFELQSP------ESKTHSTWNEASRVDTSRAETSRESRIDSPLGERTRDIASA 412

Query: 405 NPWVA-------------SPKTASTGKERYGSASVSKKEAAVYQTLMQTPDLSDEEPSTA 451
            P+                 ++ S G+ R  +   SK   A Y  L+QTP  S ++    
Sbjct: 413 RPYAGVQSNAYGSMAVPRESRSGSAGESRARAELPSKVAIASYGELLQTPSYSVQD---- 468

Query: 452 STIVSSIEAVKANIAIEKLGKAIQVVAGQYLLMSSPQGCVLISLYQ-AQQLKLRGLLNAQ 510
                  + V A  AI         + GQY +++  Q   L+ +   A   +   +    
Sbjct: 469 ----KPYQPVLAMPAI---------LNGQYWVLAQGQNLSLLPIQSVALATRSHEVETKL 515

Query: 511 HGALKAQPLLVPLALKLNESEWQVAQRHSSALLQLGIELKSRTNHSIMVMAVPQPLRQQN 570
              L  QPLL+P+++  +     + + H + + QLG+EL  R    +++  VP  LR   
Sbjct: 516 ATGLIGQPLLMPVSIAADTDWPALLEEHETLIRQLGLELTIR-YQQLIIKKVPPYLRDSQ 574

Query: 571 LQQLLPDLLSYAASCSESQALSHQALADWLTQR 603
           L +++P+ L         +A +  ALA WL ++
Sbjct: 575 LAKVIPEWL----QSLRFEAPAPNALAVWLAEQ 603