Pairwise Alignments

Query, 581 a.a., N-acetylmuramoyl-L-alanine amidase from Vibrio cholerae E7946 ATCC 55056

Subject, 408 a.a., N-acetylmuramoyl-L-alanine amidase from Pseudomonas syringae pv. syringae B728a

 Score =  221 bits (562), Expect = 6e-62
 Identities = 131/386 (33%), Positives = 202/386 (52%), Gaps = 4/386 (1%)

Query: 19  LLFGFVLLAIAPQTWANVLEGVRVWPSPDETRVVLDVKSEVDYSYFTLSSPERLVVDLKQ 78
           +L     L +    +A  +   R+W + D+ R+VLD+   V Y  FTL++P+RL++D+  
Sbjct: 10  MLLASAALTLPLGAFATQIRNARLWRTNDKLRLVLDLSGPVQYKTFTLTAPDRLIIDVSG 69

Query: 79  STSRAKLPVNVTESGILSKVRASSPPEKSTFRLVFELKQKTTPTLFKLAPTPGGQYGHRL 138
           S           +  ++  +R+    +    R+V +L        F L P  GGQ GHRL
Sbjct: 70  SRLTGDFSQLALDRTVIKSIRSGHYGQGDDTRIVLDLTAPVQLNSFLLGPE-GGQ-GHRL 127

Query: 139 VIDMPHGKVSESSSASTPSSPAQVSKDASQLLGNDDIVVAIDAGHGGEDPGSIGPTRKYE 198
           V+DM     +    A  P  P  V    S+     DI+V +DAGHGG+DPG++G   + E
Sbjct: 128 VLDMSSTAHAPVQMAELPP-PVPVPIPTSKAHTGRDIMVVVDAGHGGKDPGAVGSRGERE 186

Query: 199 KDITLSVSKKLADQLNAVPGMKAVLTRRGDYFVNLNKRTEIARRSKAHLLVSVHADAFHT 258
           KD+ LS+++ LA +L    G    L R  D+FV L KR E A +S A + +SVHADA   
Sbjct: 187 KDVVLSIAQLLARRLKREKGFDVRLVRNDDFFVPLRKRVEFAHKSNADMFISVHADAAPR 246

Query: 259 PQPRGGSVFVLNTRRANTEIARWVENHEQQSELLGGAGEVLSKTNNDRNVSQTLLDLQFS 318
               G SVF L+   A +  AR++   E  ++LL GA  +L+  + D  ++  +LD+  +
Sbjct: 247 LTASGASVFALSEGGATSATARFMAQRENGADLL-GATSLLNLKDKDPMLAGVILDMSMN 305

Query: 319 HSQKEGYKVATNILREMGKVAHLHKTEPVNASLAVLKSPDIPSVLVETGFISNPSEEKLL 378
            +     ++   +L  +  +  LH+     A  AVLKSPD+PS+LVETGFISN  + + L
Sbjct: 306 ATIAASLQLGHTVLGSLEGITTLHQKRVEQAGFAVLKSPDVPSILVETGFISNSRDSQRL 365

Query: 379 IQRSHQDKLARALATAIVQYFEDNPP 404
           +   HQ  +A  L   + +YF+ NPP
Sbjct: 366 VTARHQQAVADGLFDGLQRYFQRNPP 391