Pairwise Alignments

Query, 581 a.a., N-acetylmuramoyl-L-alanine amidase from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., N-acetylmuramoyl-L-alanine amidase from Synechocystis sp000284455 PCC 6803

 Score = 94.7 bits (234), Expect = 5e-24
 Identities = 98/380 (25%), Positives = 159/380 (41%), Gaps = 67/380 (17%)

Query: 25  LLAIAPQTWANVLEGVRVWPSP-DETRVVLDVKSEVDYSYFTLSSPERLVVDLKQSTSRA 83
           L A+AP  WA  LE    W     ++R+ +    +V      L +P R+VVDL     R 
Sbjct: 22  LPALAPPVWAGSLE---YWKFDLRDSRLDIITDEDVRPQVNVLRNPTRVVVDLPGIEHRG 78

Query: 84  KLPVNVTESGILSKVRASSPPEKSTFRLVFELKQKTTPTLFKLAPTPGGQYGHRLVIDMP 143
              +    +  + + R       ST R+V EL +  T   +++     G   +R    +P
Sbjct: 79  PT-IYKPLTQYVKEARVGRWNNNST-RIVLELTEPFTVKPWEVQVR--GLAPNRWYARLP 134

Query: 144 HGKVSESSSASTPSSPAQVSKDASQLLGNDDIVVAIDAGHGGEDPGSIGPTRKYEKDITL 203
              + + S  S P     V+  A          V +DAGHGG+DPG+IG     EKD+ L
Sbjct: 135 --TILQPSEYSLPQETVAVNVPAPAPRPLRRFTVVLDAGHGGQDPGAIGQRGIREKDVVL 192

Query: 204 SVSKKLADQLNAVPGMKAVLTRRGDYFVNLNKRTEIARRSKAHLLVSVHADA--FHTPQP 261
           ++++ +A +L    G++ V+TR  D FV+L  R + A  ++A + VS+HA++     P+ 
Sbjct: 193 AITRGVARELEK-QGIEVVMTRNSDIFVSLQGRVQRAAAARADIFVSIHANSIGLGRPEV 251

Query: 262 RGGSVFVLNTRRANTEIARWVENHEQQSELLGGAGEVLSKTN-NDRNVSQTLLDLQFSHS 320
            G   +   T R+   +A+ +               +L + N  DR V Q          
Sbjct: 252 NGVETYYFQTGRS---LAQTIHR------------SILQRLNVRDRRVRQ---------- 286

Query: 321 QKEGYKVATNILREMGKVAHLHKTEPVNASLAVLKSPDIPSVLVETGFISNPSEEKLLIQ 380
                                       A   VL+   +PS LVE GF++   + + L  
Sbjct: 287 ----------------------------ARFYVLRRTSMPSTLVEVGFVTGSQDSRNLSN 318

Query: 381 RSHQDKLARALATAIVQYFE 400
              Q ++A A+A  IVQY +
Sbjct: 319 PRFQQQMAEAIAAGIVQYLK 338