Pairwise Alignments

Query, 581 a.a., N-acetylmuramoyl-L-alanine amidase from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., N-acetylmuramoyl-L-alanine amidase from Synechococcus elongatus PCC 7942

 Score = 92.8 bits (229), Expect = 2e-23
 Identities = 91/344 (26%), Positives = 154/344 (44%), Gaps = 65/344 (18%)

Query: 68  SPERLVVDLKQSTSRAKLPVN---VTESGILSKVRASSPPEKSTFRLVFELKQKTT--PT 122
           +P+R+V+DL  +T    LP N   +     + ++R   P E    RLV E+    T  P+
Sbjct: 57  NPQRIVIDLPGAT----LPANRSPIQGGAGIREIRVGQP-EAGITRLVIEIAPGYTVDPS 111

Query: 123 LFKLAPTPGGQYGHRL--VIDMPHGKVSESSSASTP--SSPAQVSKDASQLLGNDDIVVA 178
             ++       +  RL   +    G +    S  TP  S   Q+    S  +G    +V 
Sbjct: 112 QLRVEGLDATTWQIRLQPALRFAGGGIVPPRSPVTPPPSRQPQLPPPRSPQVGRQ--IVV 169

Query: 179 IDAGHGGEDPGSIGPTRKYEKDITLSVSKKLADQLNAVPGMKAVLTRRGDYFVNLNKRTE 238
           ID GHGG DPG+IG     E ++ L +S+++A  L    G+   +TR  D  ++L  R +
Sbjct: 170 IDPGHGGPDPGAIGINGLQEAELVLDISQQVAAILRN-SGLDVRMTRTADIDLDLEPRVQ 228

Query: 239 IARRSKAHLLVSVHADAFHTPQPRGGSVFVLNTRRANTEIARWVENHEQQSELLGGAGEV 298
           IA +++A + VS+HA+A    +P                    +E +   S+    AGE 
Sbjct: 229 IAEQARADIFVSIHANALSLDRPE----------------VNGLETYYYASQ----AGER 268

Query: 299 LSKTNNDRNVSQTLLDLQFSHSQKEGYKVATNILREMGKVAHLHKTEPVNASLAVLKSPD 358
           L++T     + Q++L              ++  +R+ G            A   V++   
Sbjct: 269 LART-----IHQSIL--------------SSVSIRDRG---------VRQARFYVIRRTT 300

Query: 359 IPSVLVETGFISNPSEEKLLIQRSHQDKLARALATAIVQYFEDN 402
           +P+VLVETGF++   + + L   +H+ K+A A+A  I+QY   N
Sbjct: 301 MPAVLVETGFVTGSEDSRNLANPNHRRKMAEAIARGILQYVRQN 344