Pairwise Alignments

Query, 581 a.a., N-acetylmuramoyl-L-alanine amidase from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., N-acetylmuramoyl-L-alanine amidase AMIC precursor transmembrane protein from Sinorhizobium meliloti 1021

 Score =  156 bits (395), Expect = 1e-42
 Identities = 122/409 (29%), Positives = 204/409 (49%), Gaps = 24/409 (5%)

Query: 5   ESVGVMLNVSRFVFLLFGFVLLAIAPQTWANVLEGV-------RVWPSPDETRVVLDVKS 57
           E++G    +  FV   FG VLL ++P       E V       R+      TR+V++   
Sbjct: 18  EAIGRHRGMRMFV-AAFGAVLLLLSPVAVVRAGEPVPLLAYAARIAGDDARTRLVIEFDR 76

Query: 58  EVDYSYFTLSSPERLVVDLKQSTSRAKLPVNVTESGILSKVRASSPPEKSTFRLVFELKQ 117
           E  +S   +++P R++VDL +++   K P ++   G+   +R       ++ RLV     
Sbjct: 77  EPAFSIHYVANPVRVIVDLPETSFGLK-PESLQPRGLFDAIRYGGMGAGAS-RLVLSANG 134

Query: 118 KTTPTLFKLAPTPGGQYGHRLVIDMPH-------GKVSESSSASTPSSPAQVSKDASQLL 170
            T  T  ++ P   G+ G RLV+D            ++E     T  S       A+   
Sbjct: 135 PTEVTHAEVKPVEDGK-GFRLVLDAERIGQDRFDKLLAEQQWTGTVPSAKTDRPAAAPRP 193

Query: 171 GNDDIVVAIDAGHGGEDPGSIGP-TRKYEKDITLSVSKKLADQLNAVPGMKAVLTRRGDY 229
                VVAIDAGHGG D G+IG  T+  EK +TL+ +K+L ++LN  PG++A LTR  D 
Sbjct: 194 KAGVFVVAIDAGHGGIDTGAIGGVTKTEEKHVTLAFAKELVERLNHEPGIEAFLTRERDE 253

Query: 230 FVNLNKRTEIARRSKAHLLVSVHADAFHTPQPRGGSVFVLNTRRANTEIARWVENHEQQS 289
           F++L +R +IAR+  ++L +SVHAD     + RG +V+ ++  +A+  +A  +   E  S
Sbjct: 254 FLSLPQRVQIARQRGSNLFISVHADTLRQKEIRGATVYTISD-KASDHLAADLAARENLS 312

Query: 290 ELLGGAGEVLSKTNNDRNVSQTLLDLQFSHSQKEGYKVATNILREMGKVAHLHKTEPVNA 349
           + + G    +   +    V+  L+DL    +Q     +A +++        L      +A
Sbjct: 313 DEIAG----IPLESEPAEVADILIDLTRRETQAFSVNLARSVISSFEGQIKLINNPHRHA 368

Query: 350 SLAVLKSPDIPSVLVETGFISNPSEEKLLIQRSHQDKLARALATAIVQY 398
              VL++PD+PSVL+E GF+SN  +EK L+    + K++  LA A+ +Y
Sbjct: 369 GFRVLQAPDVPSVLLELGFLSNKEDEKQLLDAEWRKKVSTLLADAVQRY 417