Pairwise Alignments

Query, 581 a.a., N-acetylmuramoyl-L-alanine amidase from Vibrio cholerae E7946 ATCC 55056

Subject, 511 a.a., lytic transglycosylase, catalytic (RefSeq) from Shewanella loihica PV-4

 Score = 82.8 bits (203), Expect = 3e-20
 Identities = 61/180 (33%), Positives = 101/180 (56%), Gaps = 14/180 (7%)

Query: 412 RGKAQKHKVQRGESIGLIANQYGVSVDALKKANNLKSSTISVGQLLTIPASSAPNPVPVP 471
           R K Q++K++ G+S+GLIA ++  +  AL+  N++K++ I  G+ L IP SS  +P    
Sbjct: 324 RLKWQRYKIKSGDSLGLIAKRFNTTPSALRAVNDIKNNRIIAGKHLLIPVSS-KDPAKYL 382

Query: 472 VMANPVETE--------TITHVVKTGDFLGKLATTYKVSVASIKKENNL-KSDTLVLGQK 522
           + A     +         +++ VK+GD L  +A  +KVSVA + K N +   D L +GQK
Sbjct: 383 LSAEQRLQKRQSGGSGYKLSYKVKSGDSLWLIAKQHKVSVAKLAKWNGMAPKDPLSIGQK 442

Query: 523 LKITVSLKDKPLRK---HKVQRGEFLSKIADQYNVSVDSIRQANQLRTDQLL-VGQQLII 578
           L I      K + +   + V+ G+ L+KIA ++NVSV  + + N L T + L  GQ+L +
Sbjct: 443 LVIWQQGDSKAVTRTVNYTVRSGDSLAKIATKFNVSVSQLVKWNSLSTKKYLQPGQKLTL 502