Pairwise Alignments

Query, 581 a.a., N-acetylmuramoyl-L-alanine amidase from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., N-acetylmuramoyl-L-alanine amidase from Dechlorosoma suillum PS

 Score =  244 bits (624), Expect = 4e-69
 Identities = 149/413 (36%), Positives = 225/413 (54%), Gaps = 60/413 (14%)

Query: 40  VRVWPSPDETRVVLDVKSE----VDYSYFTLSSPERLVVDLKQSTSRAKLPVNVTESGIL 95
           VRVWP+ D TRV L+  +     + ++ F++ +PERLVVD++       +  N    G+ 
Sbjct: 45  VRVWPAADYTRVTLEHDAPGGAPLKFTQFSVKNPERLVVDIEG------IEFNSVLDGLS 98

Query: 96  SKVRASSPPEK---------STFRLVFELKQKTTPTLFKLAPTPGGQYGHRLVIDM---- 142
           +KV    P  K            RLV ELK +  P +F L P   G+YG RLV+D+    
Sbjct: 99  NKVAPDDPYIKLLRAGRFKPGVVRLVMELKTEVQPQVFSLKPV--GEYGSRLVLDVYPAN 156

Query: 143 -------------------------------PHGKVSESSSASTPSSPAQVSKDASQLLG 171
                                             +  ++   +  + PA+ +K  ++ + 
Sbjct: 157 PPDPLLSLLDKKDGDGLDAIAEAGRREPVAEAPSQAQQAPGRAQEARPAEPAKRNTKPVV 216

Query: 172 NDDIVVAIDAGHGGEDPGSIGPTRKYEKDITLSVSKKLADQLNAVPGMKAVLTRRGDYFV 231
           +  + + +D GHGGEDPG++G    +EKD+ LS++K+L  +++A P M+AVLTR  D+FV
Sbjct: 217 DRLVTITLDPGHGGEDPGAVGKGGSHEKDVVLSIAKRLKAKIDAEPNMRAVLTRDSDFFV 276

Query: 232 NLNKRTEIARRSKAHLLVSVHADAFHTPQPRGGSVFVLNTRRANTEIARWVENHEQQSEL 291
            L+ R + ARR +A L VS+HADA+  P  RG SVFVL+ R A++  ARW+   E +++L
Sbjct: 277 PLHMRVQKARRVQADLFVSIHADAWIKPDARGSSVFVLSERGASSSQARWLAQKENEADL 336

Query: 292 LGGAGEVLSKTNNDRNVSQTLLDLQFSHSQKEGYKVATNILREMGKVAHLHKTEPVNASL 351
           +GG    +     D  +++TLLDL  + +  +  K+   +L E+G +  LHK     A  
Sbjct: 337 IGGVNIGV----KDPFLARTLLDLSQTATINDSLKLGKAVLGELGGINALHKASVEQAGF 392

Query: 352 AVLKSPDIPSVLVETGFISNPSEEKLLIQRSHQDKLARALATAIVQYFEDNPP 404
           AVLK+PDIPS+LVET FISNP EEK L   ++QD++A A+   I QYF  NPP
Sbjct: 393 AVLKAPDIPSILVETAFISNPEEEKRLNDDAYQDRMAEAMLKGIRQYFAKNPP 445