Pairwise Alignments

Query, 581 a.a., N-acetylmuramoyl-L-alanine amidase from Vibrio cholerae E7946 ATCC 55056

Subject, 417 a.a., N-acetylmuramoyl-L-alanine amidase AmiC from Enterobacter sp. TBS_079

 Score =  223 bits (567), Expect = 2e-62
 Identities = 137/384 (35%), Positives = 202/384 (52%), Gaps = 35/384 (9%)

Query: 40  VRVWPSPDETRVVLDVKSEVDYSYFTLSSPERLVVDLKQSTSRAKLPVNVTESGILSKVR 99
           VRVWPS   TRV ++    + Y  F LS+PER+VVDL+       + +N    G+ +++R
Sbjct: 39  VRVWPSSTYTRVTVESNRVLKYKQFALSNPERVVVDLEG------VNLNSVLKGMAAQIR 92

Query: 100 ASSPPEKS---------TFRLVFELKQKTTPTLFKLAPTPGGQYGHRLVIDMPHGKVSE- 149
              P  KS         T R+VFELKQ   P LF LAP     +  RLV+D+     ++ 
Sbjct: 93  GDDPFIKSARVGQFDPQTVRMVFELKQNVKPQLFALAPV--ATFKERLVMDLYPANATDI 150

Query: 150 ------------SSSASTPSSPAQVSKDASQLLGNDDIVVAIDAGHGGEDPGSIGPTRKY 197
                         +      PAQ      +   +  IV+ +D GHGGED G++G  R  
Sbjct: 151 QDPLLALLEDYNQGNLEKQVPPAQSGPQPGKAGRDRPIVIMLDPGHGGEDSGAVGKYRTR 210

Query: 198 EKDITLSVSKKLADQLNAVPGMKAVLTRRGDYFVNLNKRTEIARRSKAHLLVSVHADAFH 257
           EKD+ L ++++L   ++    M+A +TR  D F+ L  R   A++ +A L VS+HADAF 
Sbjct: 211 EKDVVLQIARRLKALIDKEGNMRAYMTRNEDVFIPLKVRVAKAQKQRADLFVSIHADAFT 270

Query: 258 TPQPRGGSVFVLNTRRANTEIARWVENHEQQSELLGGAGEVLSKTNNDRNVSQTLLDLQF 317
           + QP G SVF L+T+ A +  AR++ + +  S+L+GG  +     + DR V  T+ D+  
Sbjct: 271 SRQPSGSSVFALSTKGATSTAARFLADSQNASDLIGGVSK-----SGDRYVDHTMFDMVQ 325

Query: 318 SHSQKEGYKVATNILREMGKVAHLHKTEPVNASLAVLKSPDIPSVLVETGFISNPSEEKL 377
           S +  +  K    +L ++G V  LHK     A  AVLK+PDIPS+LVET FISN  EE+ 
Sbjct: 326 SLTITDSLKFGKAVLGKLGNVNKLHKNSVEQAGFAVLKAPDIPSILVETAFISNVEEERK 385

Query: 378 LIQRSHQDKLARALATAIVQYFED 401
           L     Q ++A ++   I  YF D
Sbjct: 386 LRTAKFQQEVAESILAGIRAYFSD 409