Pairwise Alignments

Query, 581 a.a., N-acetylmuramoyl-L-alanine amidase from Vibrio cholerae E7946 ATCC 55056

Subject, 538 a.a., N-acetylmuramoyl-L-alanine amidase from Dyella japonica UNC79MFTsu3.2

 Score =  269 bits (687), Expect = 2e-76
 Identities = 198/594 (33%), Positives = 296/594 (49%), Gaps = 108/594 (18%)

Query: 23  FVLLAIAP--QTWANVLEGVRVWPSPDETRVVLDVKSEVDYSYFTLSSPERLVVDLKQST 80
           FV LA+AP     A  ++  RVW  P+ TR+VLDV   VDY   T    ++LV+DL +S 
Sbjct: 14  FVALAMAPLCAVHAADVKSARVWAGPEYTRLVLDVSGPVDYK--TRQDGDQLVIDLGRSG 71

Query: 81  SRAKLPVNVTESGILSKVRASSPPEKSTFRLVFELKQKTTPTLFKLAPTPGGQYGHRLVI 140
                    ++ G+L  +   S  + +  +LV ++   +    F L P     YG+RLV+
Sbjct: 72  LADDYAAPKSQ-GLLKGL--DSNQQGNRLQLVAKVDSSSHYKSFVLQPA--ANYGYRLVV 126

Query: 141 DM-PHGKVSESSSA---------------------------------STPSSPAQVSKDA 166
           D+ P   V+ SS A                                 ST S  A   + A
Sbjct: 127 DVYPGNGVAASSKAVPAPAQDDGDDDAAPPPAPVAIKTAASGKNSLKSTQSGMASTRQAA 186

Query: 167 SQLLGNDDIVVAIDAGHGGEDPGSIGPTRKYEKDITLSVSKKLADQLNAVPGMKAVLTRR 226
           + L G   +VVA+DAGHGG+DPG+ GP    EK++TL+V+++LA Q+N  PGMKAVLTR 
Sbjct: 187 ALLNGERKVVVAVDAGHGGQDPGAHGPGGTLEKNVTLAVARELAAQINKQPGMKAVLTRD 246

Query: 227 GDYFVNLNKRTEIARRSKAHLLVSVHADAFHTPQPRGGSVFVLNTRRANTEIARWVENHE 286
            D+F+ L +R +IARR+ A L VSVHADAF     +G SV+VL+ R   +E ARW+ + E
Sbjct: 247 SDFFIPLKQRYDIARRNNADLFVSVHADAFVNGDAKGSSVWVLSPRGKTSEAARWLADRE 306

Query: 287 QQSELLGGAGEVLSKTNNDRNVSQTLLDLQFSHSQKEGYKVATNILREMGKVAHLHKTEP 346
            +++L+GG    +S  + D +++  LLDLQ  ++ +    VATN+L+ +G +   H+   
Sbjct: 307 NRADLIGG----VSLDDKDDSLAAVLLDLQQGYAMQASEAVATNVLKALGGLGPTHRGYV 362

Query: 347 VNASLAVLKSPDIPSVLVETGFISNPSEEKLLIQRSHQDKLARALATAIVQYFEDNPPEG 406
             A+  VL+SPD+PS+LVET FISNP EE+ L   SHQ  LA A+   +  YFE  PP G
Sbjct: 363 ERANFVVLRSPDVPSILVETAFISNPDEERKLRDPSHQSHLAEAVMGGVRSYFESTPPPG 422

Query: 407 TLFANRGKAQKHKVQRGESIGLIANQYGVSVDALKKANNLKSSTISVGQLLTIPASSAPN 466
           + FA +   +                 G  V ++ K+++  +           P S+A +
Sbjct: 423 SWFAAQASRRN----------------GTVVASVPKSDDDDADH---------PVSTAAS 457

Query: 467 PVPVPVMANPVETETITHVVKTGDFLGKLATTYKVSVASIKKENNLKSDTLVLGQKLKIT 526
                 MA                     A + +V VAS K + +            +  
Sbjct: 458 KAVAQAMAGS-------------------ARSGEVKVASAKNDGD------------RAD 486

Query: 527 VSLKDKPLRKHKVQRGEFLSKIADQYNVSVDSIRQANQ-LRTDQLLVGQQLIIP 579
            +++D     H+V  GE L  IA QY VS+ +++ AN+ + TD +  G  L IP
Sbjct: 487 ANVRDL----HRVTAGESLRSIARQYGVSITALKNANRSINTDAVHAGMVLAIP 536