Pairwise Alignments

Query, 581 a.a., N-acetylmuramoyl-L-alanine amidase from Vibrio cholerae E7946 ATCC 55056

Subject, 587 a.a., transglycosylase, SLT family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 59.7 bits (143), Expect = 3e-13
 Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 1/111 (0%)

Query: 416 QKHKVQRGESIGLIANQYGVSVDALKKANNLKSSTISVGQLLTIPASSAPNPVPVPVMAN 475
           Q + V++G+++  +  + GV V  LK+ N ++S+ + VG  L IP  +   P   P +  
Sbjct: 364 QPYTVRKGDTLERVGKRAGVPVSVLKQVNKVRSNNLKVGSTLLIPGGTHHEPDTGPAIKR 423

Query: 476 PVETETITHVVKTGDFLGKLATTYKVSVASIKKENNL-KSDTLVLGQKLKI 525
            +     +++VK GD L  +A T  V + ++ + N + ++ TL +GQKL I
Sbjct: 424 ALAERRGSYIVKQGDTLYSIARTQGVELNTLMQANGMAEAHTLRVGQKLYI 474



 Score = 49.3 bits (116), Expect = 4e-10
 Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 13/154 (8%)

Query: 420 VQRGESIGLIANQYGVSVDALKKANNL-KSSTISVGQLLTIPASS-APNPVPVPVMANPV 477
           V++G+++  IA   GV ++ L +AN + ++ T+ VGQ L IP  S AP P PV       
Sbjct: 434 VKQGDTLYSIARTQGVELNTLMQANGMAEAHTLRVGQKLYIPGGSEAPAPQPVATSKPEK 493

Query: 478 ETETITHVVKTGDFLGKLATTYKVSVASIKKENNLKSDTLVLGQKLKITVSLKDKPLRKH 537
               +     T +    +A+   + V++ K  +     +  +  K   TV+        +
Sbjct: 494 PQAPVARATSTPEPRQLVASVTAMPVSAAKAPSRSAGPSAAVKTK---TVT--------Y 542

Query: 538 KVQRGEFLSKIADQYNVSVDSIRQANQLRTDQLL 571
           KVQ+G+ +  IA ++NV    + + N+L  D +L
Sbjct: 543 KVQQGDTMWAIARKFNVHPKELMRQNRLEMDTVL 576



 Score = 34.7 bits (78), Expect = 1e-05
 Identities = 14/43 (32%), Positives = 28/43 (65%)

Query: 537 HKVQRGEFLSKIADQYNVSVDSIRQANQLRTDQLLVGQQLIIP 579
           + V++G+ L ++  +  V V  ++Q N++R++ L VG  L+IP
Sbjct: 366 YTVRKGDTLERVGKRAGVPVSVLKQVNKVRSNNLKVGSTLLIP 408



 Score = 28.1 bits (61), Expect = 0.001
 Identities = 14/46 (30%), Positives = 25/46 (54%)

Query: 406 GTLFANRGKAQKHKVQRGESIGLIANQYGVSVDALKKANNLKSSTI 451
           G   A + K   +KVQ+G+++  IA ++ V    L + N L+  T+
Sbjct: 530 GPSAAVKTKTVTYKVQQGDTMWAIARKFNVHPKELMRQNRLEMDTV 575