Pairwise Alignments

Query, 581 a.a., N-acetylmuramoyl-L-alanine amidase from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., N-acetylmuramoyl-L-alanine amidase, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  105 bits (263), Expect = 4e-27
 Identities = 105/380 (27%), Positives = 177/380 (46%), Gaps = 38/380 (10%)

Query: 36  VLEGVRVWPSPDETRVVLDVKSEVDYSYFTLSSPER------LVVDLKQSTSRAKLPVNV 89
           VL  V    S ++ +VV+++  E  +S+  +   ER      L++D+  + +  K+    
Sbjct: 175 VLRQVSWKVSGNDAQVVIELDREARWSHQFVPGDERTGRASRLIIDVDGARADEKVRPGA 234

Query: 90  TESG-ILSKVRASSPPEKSTFRLVFELKQKTTPTLFKLAPTPGGQYGHRLVIDMPHGK-- 146
             SG +LS+VR     +  T R++ +        +  +A  P     +R+V         
Sbjct: 235 RISGKVLSRVRVDLSVKGRT-RIIIDYSDVERYDVDAIAGRP-----YRIVAKATRSTKG 288

Query: 147 VSESSSASTPSS---PAQVSKDASQLLGNDDIVVAIDAGHGGEDPGSIGPTRKYEKDITL 203
           + E +SA    S   P    KD ++ LG     + IDAGHGG+DPG++      E+++TL
Sbjct: 289 LPEGTSAEAGVSVRKPQGKPKDIAEQLGLGVKTIMIDAGHGGKDPGAMA-NGIVEREVTL 347

Query: 204 SVSKKLADQLNAVPGMKAVLTRRGDYFVNLNKRTEIARRSKAHLLVSVHADAFHTPQPRG 263
           +++K + ++L A  G K + TR+ D F+ L+ RT++A  SKA L VS+H +A       G
Sbjct: 348 AMAKLVGERLRAA-GFKVLYTRQRDVFIPLDDRTQMANNSKADLFVSLHVNANTDSSISG 406

Query: 264 GSVFVLNTRRANTEIARWVENHEQQSELLGGAGEVLSKTNNDRNVSQTLLDLQFSHSQKE 323
              + L+   A+T  A  V + E           V  K  +D  +   L DL  S   +E
Sbjct: 407 VETYYLDL--ASTSSAAKVASRE---------NSVSEKNLSD--LQYILTDLMLSAKTQE 453

Query: 324 GYKVATNILREMGKVAHLHKTEP-----VNASLAVLKSPDIPSVLVETGFISNPSEEKLL 378
              VA  +   M K    +   P      +A   VL    +P+VLVE G+ +N +E +LL
Sbjct: 454 SRDVAGMVQSSMTKRLASYGGAPHGNGVRSAPFYVLMGARMPAVLVEVGYCTNKAEARLL 513

Query: 379 IQRSHQDKLARALATAIVQY 398
               ++  LA A+   +++Y
Sbjct: 514 ASSKYRRALADAIVDGLMRY 533