Pairwise Alignments

Query, 581 a.a., N-acetylmuramoyl-L-alanine amidase from Vibrio cholerae E7946 ATCC 55056

Subject, 501 a.a., N-acetylmuramoyl-L-alanine amidase from Cupriavidus basilensis FW507-4G11

 Score =  215 bits (547), Expect = 4e-60
 Identities = 145/394 (36%), Positives = 206/394 (52%), Gaps = 35/394 (8%)

Query: 37  LEGVRVWPS-PDETRVVLDVKSEVDYSYFTL----SSPERLVVDLKQSTSRAKLPVNVTE 91
           ++ VRV  + P   R+V D+K  V    FTL    S   RLV DL        L   V +
Sbjct: 110 IQTVRVGQNRPRVVRLVFDLKENVSPQVFTLAPIGSYRNRLVFDLYPVNPPDPLWTLVRD 169

Query: 92  SGILSKVRASSPP---------------EKSTFRLVFELKQK------TTPTLFKLAPTP 130
           +    +  A++ P               E +   LV + + K        P +  + P P
Sbjct: 170 TEDKQRRFAATQPPAGADGVSGAPASGEEDAIGALVRKFEGKGANPVPALPPMAAVKPRP 229

Query: 131 GGQYGHRLVIDMPHGKVSESSSASTPSSPAQVSKDASQLLGNDDIVVAIDAGHGGEDPGS 190
                  L    P  + S  ++    + PA  S    +LL      VAID GHGGEDPG+
Sbjct: 230 PAPSSPALPSAPPLAQNSPPAALPANNPPADRSFKMRRLL-----TVAIDPGHGGEDPGA 284

Query: 191 IGPTRKYEKDITLSVSKKLADQLNAVPGMKAVLTRRGDYFVNLNKRTEIARRSKAHLLVS 250
            G +   EKD+ L ++++L  ++++ P M+A++TR  D+FV LN R + ARR +A L VS
Sbjct: 285 TGASGSREKDVVLQIAQRLRAKIDSQPNMRAMMTRDADFFVPLNVRVQKARRVQADLFVS 344

Query: 251 VHADAFHTPQPRGGSVFVLNTRRANTEIARWVENHEQQSELLGGAGEVLSKTNNDRNVSQ 310
           +HADAF +P+ +G SVF L+ R A++  ARW+ N E  S+L+GGA    +  N D  V++
Sbjct: 345 IHADAFLSPEAKGASVFALSERGASSTAARWMANKENASDLIGGA----NMGNKDAQVAR 400

Query: 311 TLLDLQFSHSQKEGYKVATNILREMGKVAHLHKTEPVNASLAVLKSPDIPSVLVETGFIS 370
            LLDL  +    +  +V   +L E+G V  LHK     A  AVLK+PDIPS+LVET FIS
Sbjct: 401 VLLDLSTTAQINDSLQVGKAVLAEIGGVNRLHKGSVEQAGFAVLKAPDIPSILVETAFIS 460

Query: 371 NPSEEKLLIQRSHQDKLARALATAIVQYFEDNPP 404
           NP EE+ L   SHQ++LA A+   I  YF  NPP
Sbjct: 461 NPEEERKLNDESHQEQLANAILRGIKNYFARNPP 494



 Score = 56.6 bits (135), Expect = 2e-12
 Identities = 41/126 (32%), Positives = 64/126 (50%), Gaps = 7/126 (5%)

Query: 22  GFVLLAIA-PQ-TWANVLEGVRVWPSPDETRVVLDVKSEVDYSYFTLSSPERLVVD---L 76
           G V+L +A PQ  +   +  VRVWP+ + TRV ++    +   +  +  P+RLVVD   L
Sbjct: 31  GSVVLTLAGPQIAFGAGIVAVRVWPAEEYTRVTIESDEPLAAVHQMIHGPDRLVVDIDGL 90

Query: 77  KQSTSRAKLPVNVTESGILSKVRASSPPEKSTFRLVFELKQKTTPTLFKLAPTPGGQYGH 136
             S +  +L   +T +    +            RLVF+LK+  +P +F LAP   G Y +
Sbjct: 91  DLSPTLRELVAKITSNDPYIQTVRVGQNRPRVVRLVFDLKENVSPQVFTLAPI--GSYRN 148

Query: 137 RLVIDM 142
           RLV D+
Sbjct: 149 RLVFDL 154