Pairwise Alignments
Query, 581 a.a., N-acetylmuramoyl-L-alanine amidase from Vibrio cholerae E7946 ATCC 55056
Subject, 474 a.a., MltD domain-containing protein (RefSeq) from Shewanella sp. ANA-3
Score = 63.9 bits (154), Expect = 1e-14
Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 22/137 (16%)
Query: 412 RGKAQKHKVQRGESIGLIANQYGVSVDALKKANNLKSSTISVGQLLTI--PASSAPNPVP 469
R +Q + V+ G+S+G IA ++ +SV LK+ANNL S I +GQ LT+ P SS N
Sbjct: 337 RYDSQSYIVKSGDSLGTIAAKFDISVKELKQANNLNSDRIKIGQELTLLTPMSSEDNTST 396
Query: 470 VPVMANPVET-------------------ETITHVVKTGDFLGKLATTYKVSVASIKKEN 510
+ +T + T+ VK+GD L K+A KV +A + K N
Sbjct: 397 ETPKQSKAQTTSQAAKAKTSSKTADKPTAKASTYKVKSGDSLDKIARKNKVKLADLMKWN 456
Query: 511 NLKSDTLV-LGQKLKIT 526
L + +++ GQ+LK++
Sbjct: 457 QLNAKSIIKSGQELKLS 473
Score = 53.1 bits (126), Expect = 2e-11
Identities = 50/214 (23%), Positives = 88/214 (41%), Gaps = 55/214 (25%)
Query: 410 ANRGKAQKHKVQRGESIGLIANQYGVSVDALKKANNLKSSTISVGQLLTIPASSAPNPVP 469
ANR ++ G + IAN G++ K T + G ++ S +
Sbjct: 265 ANRPFLERLPAPNGVELSQIANAAGLTKAEFK--------TYNPGYRQSVIPSKGKYQIA 316
Query: 470 VPV------------MANPVETETITHVVKTGDFLGKLATTYKVSVASIKKENNLKSDTL 517
+P+ ++ ++ +++VK+GD LG +A + +SV +K+ NNL SD +
Sbjct: 317 LPIENIGQYQENQHQLSAQTRYDSQSYIVKSGDSLGTIAAKFDISVKELKQANNLNSDRI 376
Query: 518 VLGQKL-------------------------------KITVSLKDKPLRK---HKVQRGE 543
+GQ+L K + DKP K +KV+ G+
Sbjct: 377 KIGQELTLLTPMSSEDNTSTETPKQSKAQTTSQAAKAKTSSKTADKPTAKASTYKVKSGD 436
Query: 544 FLSKIADQYNVSVDSIRQANQLRTDQLL-VGQQL 576
L KIA + V + + + NQL ++ GQ+L
Sbjct: 437 SLDKIARKNKVKLADLMKWNQLNAKSIIKSGQEL 470
Score = 37.7 bits (86), Expect = 1e-06
Identities = 15/40 (37%), Positives = 29/40 (72%)
Query: 539 VQRGEFLSKIADQYNVSVDSIRQANQLRTDQLLVGQQLII 578
V+ G+ L IA ++++SV ++QAN L +D++ +GQ+L +
Sbjct: 345 VKSGDSLGTIAAKFDISVKELKQANNLNSDRIKIGQELTL 384