Pairwise Alignments

Query, 478 a.a., transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 610 a.a., transcriptional regulator from Klebsiella michiganensis M5al

 Score = 64.3 bits (155), Expect = 1e-14
 Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 11/157 (7%)

Query: 109 FSAFSSPIIILFMGGFALAIAASKYELDNNLARVLLKPFGHQPKYIMLG-LMLITSVFSM 167
           + A   P IIL +G    A+A  K    + + + L+   G +  Y+MLG L ++ +   +
Sbjct: 462 YKAIHWPSIILIVGMMPFALALQKTGGVDLVVQGLMDVAGSKGPYLMLGCLFVMCAAIGL 521

Query: 168 FMSNTATTVMMLALLGPIVASAPKGDLGIKALVLCIPIA-ANTGGIATPIGTPPNAIALQ 226
           F+SNTAT V+M     PI  +A K  +G+      + +A A +    TP+ +P N + L 
Sbjct: 522 FISNTATAVLM----APIALAAAK-SMGVSPYPFAMVVAMAASAAFMTPVSSPVNTLVL- 575

Query: 227 YLTGENSIDFLSWMMMGLPFVLVQLTIAWFLLQKLFP 263
              G     F  ++ +G+PF ++ + +   L+  LFP
Sbjct: 576 ---GPGKYSFSDFVKIGVPFTILVMVVCVLLIPVLFP 609



 Score = 63.5 bits (153), Expect = 2e-14
 Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 14/173 (8%)

Query: 314 PLAVFTLTGIMGK-------EELKQINWDVLWLVAGGIAIGIGLEQTGLAQALAHSID-- 364
           P+A      +MGK          K I+W  + L+ G +   + L++TG    +   +   
Sbjct: 440 PIAAIVACLLMGKFRCINAESAYKAIHWPSIILIVGMMPFALALQKTGGVDLVVQGLMDV 499

Query: 365 YQSLSPMLIVIALSLVCWLMANFMSNTATANLIMPIAAAIGTSMSSLEQVGGLQALLVVV 424
             S  P L++  L ++C  +  F+SNTATA L+ PIA A   SM             +VV
Sbjct: 500 AGSKGPYLMLGCLFVMCAAIGLFISNTATAVLMAPIALAAAKSMGV-----SPYPFAMVV 554

Query: 425 AFSASLGMILPVSTPPNSLAYSTGLIESKDMAKTGLVIGGIGLGIVYLMVFLL 477
           A +AS   + PVS+P N+L    G     D  K G+    + + +  L++ +L
Sbjct: 555 AMAASAAFMTPVSSPVNTLVLGPGKYSFSDFVKIGVPFTILVMVVCVLLIPVL 607



 Score = 49.3 bits (116), Expect = 4e-10
 Identities = 50/209 (23%), Positives = 93/209 (44%), Gaps = 22/209 (10%)

Query: 58  LLWVLE----PVPVFATS-ILIIALELVMISDKGLHGFRVPDPHHPLGELLKYTDIFSAF 112
           L+WVL      V +FAT  + + A+ L++I    L G             L  ++ FS F
Sbjct: 5   LIWVLSLLAVAVVLFATGKVRMDAIALLVIVAFVLSG------------TLTLSEAFSGF 52

Query: 113 SSPIIILFMGGFALAIAASKYELDNNLARVLLKPFGHQPKYIMLGLMLITSVFSMFMSNT 172
           S P +IL    F +     +  +   +   L+K  G+    +++ LML  +    FMS+T
Sbjct: 53  SDPNVILIAALFIIGDGLVRTGVATKMGSWLVKVAGNSETKMLVYLMLTVAGLGAFMSST 112

Query: 173 ATTVMMLALLGPIVAS-APKGDLGIKALVLCIPIAANTGGIATPIGTPPNAIALQYLTGE 231
                ++A+  P+V S + + +     L++ +  A    G+ T + TPPN +    L  E
Sbjct: 113 G----VVAIFIPVVLSVSMRMNTSPSRLMMPLSFAGLISGMMTLVATPPNLVVNSELLRE 168

Query: 232 NSIDFLSWMMMGLPFVLVQLTIAWFLLQK 260
               F  + +  +  V++ L + + L+ +
Sbjct: 169 GLQGFSFFSVTPIGLVVLVLGVFYMLVMR 197



 Score = 32.3 bits (72), Expect = 5e-05
 Identities = 49/211 (23%), Positives = 87/211 (41%), Gaps = 55/211 (26%)

Query: 291 ALTIVLWMTTSWHGMNTYVVAIIPLAVFTLTGIMG-KEELKQINWDVLWLVAGGIAIGIG 349
           A+ +VL+ T     +    +A++ +  F L+G +   E     +   + L+A    IG G
Sbjct: 13  AVAVVLFATGK---VRMDAIALLVIVAFVLSGTLTLSEAFSGFSDPNVILIAALFIIGDG 69

Query: 350 LEQTGLAQALAH---SIDYQSLSPMLI-----------------VIALSLVCWLMANFMS 389
           L +TG+A  +      +   S + ML+                 V+A+ +   L  +   
Sbjct: 70  LVRTGVATKMGSWLVKVAGNSETKMLVYLMLTVAGLGAFMSSTGVVAIFIPVVLSVSMRM 129

Query: 390 NTATANLIMPIAAAIGTSMSSLEQVGGLQALLVVVAFSASLGMILPVSTPPNSLAYSTGL 449
           NT+ + L+MP++ A            GL +           GM+  V+TPPN +  S  L
Sbjct: 130 NTSPSRLMMPLSFA------------GLIS-----------GMMTLVATPPNLVVNSELL 166

Query: 450 IESK------DMAKTGLVIGGIGLGIVYLMV 474
            E         +   GLV+  + LG+ Y++V
Sbjct: 167 REGLQGFSFFSVTPIGLVV--LVLGVFYMLV 195