Pairwise Alignments

Query, 478 a.a., transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 504 a.a., Na+/dicarboxylate or sulfate symporter (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  461 bits (1187), Expect = e-134
 Identities = 225/467 (48%), Positives = 332/467 (71%), Gaps = 5/467 (1%)

Query: 17  VKLLICFLLPLGVLLMPIDAIPIQDLTLVQHRLLAIFLLAALLWVLEPVPVFATSILIIA 76
           +KL I   L L +  +PID   I+ LT+++ RL++IF+ A L+WV E VP + TS+LI+ 
Sbjct: 33  IKLTIAITLSLILWFLPIDTFGIEGLTVIEQRLISIFIFATLMWVFEAVPAWTTSVLIVV 92

Query: 77  LELVMISDKGLHGFRVPDPHHPLGELLKYTDIFSAFSSPIIILFMGGFALAIAASKYELD 136
           L L+ +SD  L       P   LG+ +KY  I   F+ PII+LF+GGF LAIAA+K  LD
Sbjct: 93  LLLLTVSDSSLWFLTQNTPAEELGQTVKYKSILHCFADPIIMLFIGGFILAIAATKSGLD 152

Query: 137 NNLARVLLKPFGHQPKYIMLGLMLITSVFSMFMSNTATTVMMLALLGPIVASAPKGDLGI 196
             LARV+L+PFG Q +Y++LG +L+T+VFSMF+SNTAT  MML  L P++ + P    G 
Sbjct: 153 VLLARVMLRPFGTQSRYVLLGFILVTAVFSMFLSNTATAAMMLTFLTPVLKALPADGKGK 212

Query: 197 KALVLCIPIAANTGGIATPIGTPPNAIALQYLTGEN----SIDFLSWMMMGLPFVLVQLT 252
             L + IP+AAN GG+ TPIGTPPNAIAL+YL        +I F  WM   LP+ ++ L 
Sbjct: 213 IGLAMAIPVAANVGGMGTPIGTPPNAIALKYLNDPEGLNLNIGFGEWMSFMLPYTIIVLF 272

Query: 253 IAWFLLQKLFPSSQATMTLKLKGEFQRGWRAMLVYITFALTIVLWMTTSWHGMNTYVVAI 312
           IAWF+L +LFP  Q ++ L+++GE ++ WR+++VYITFA+T++LWM   + G+N+ VVA+
Sbjct: 273 IAWFILLRLFPFKQKSIELQIEGEAKKDWRSIVVYITFAITVLLWMFDKFTGVNSNVVAM 332

Query: 313 IPLAVFTLTGIMGKEELKQINWDVLWLVAGGIAIGIGLEQTGLAQALAHSIDYQSLSPML 372
           IP+AVF +TG++ K +L++I+W VLW+VAGG A+G+ L++TGLA+ +  +I + +  P+L
Sbjct: 333 IPVAVFCITGVITKRDLEEISWSVLWMVAGGFALGVALQETGLAKHMIEAIPFSTWPPVL 392

Query: 373 IVIALSLVCWLMANFMSNTATANLIMPIAAAIGTSM-SSLEQVGGLQALLVVVAFSASLG 431
           +++   L+C+ MANF+S+TATA L++PI A  G SM  +L  +GG++ LL+ VA  +SL 
Sbjct: 393 MIVGSGLICYAMANFISHTATAALLVPILAIAGISMRENLSSLGGVETLLIGVAIGSSLA 452

Query: 432 MILPVSTPPNSLAYSTGLIESKDMAKTGLVIGGIGLGIVYLMVFLLG 478
           MILP+STPPN+LA++TG+I+ KDM K G+++G IGL + Y M+ +LG
Sbjct: 453 MILPISTPPNALAHATGMIQQKDMEKVGIIMGIIGLILGYTMLIILG 499