Pairwise Alignments

Query, 478 a.a., transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 619 a.a., putative Na+/sulphate transporter (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 71.6 bits (174), Expect = 7e-17
 Identities = 48/167 (28%), Positives = 85/167 (50%), Gaps = 10/167 (5%)

Query: 101 ELLKYTDIFSAFSSPIIILFMGGFALAIAASKYELDNNLARVLLKPFGHQPKYIMLGLML 160
           ++L   +  S FS+ ++I+ +G F +  A  +  L   ++  +LK  G+    +   +ML
Sbjct: 37  QILTPDEALSGFSNSVVIMMIGLFVVGGAIFQTGLAKMISSRILKLAGNSEIRLFFLVML 96

Query: 161 ITSVFSMFMSNTATTVMMLALLGPIVASAPKGDLGIKALVLCIPIAANTGGIATPIGTPP 220
           +TS    F+SNT T  +ML +   +V+ A    +    L++ +  A++ GG+ T IGTPP
Sbjct: 97  VTSAIGAFVSNTGTVALMLPI---VVSLAMSAKMNPSRLLMPLAFASSMGGMMTLIGTPP 153

Query: 221 NAIALQYLT--GENSIDFLSWMMMGLPFVLVQLTI-----AWFLLQK 260
           N +    LT  G   + F +++ +GL  V V   +      WFL +K
Sbjct: 154 NLVIQNTLTSAGFEPLSFFTFLPVGLVSVAVGTLVLMPLSKWFLSKK 200



 Score = 71.6 bits (174), Expect = 7e-17
 Identities = 54/166 (32%), Positives = 83/166 (50%), Gaps = 12/166 (7%)

Query: 317 VFTLTGIMGKEEL--KQINWDVLWLVAGGIAIGIGLEQTGLAQALAHSI--DYQSLSPML 372
           +  LTG     E   K INW+ + L+A  + + + LE+TG ++ +++++     S  P+ 
Sbjct: 457 LMVLTGCFRNVEAAYKTINWESIVLIAAMLPMSLALEKTGASEYISNTLVSGLGSYGPIA 516

Query: 373 IVIALSLVCWLMANFMSNTATANLIMPIAAAIGTSMSSLEQVG-GLQALLVVVAFSASLG 431
           ++  +     LM  F+SNTATA L+ PIA      + S  Q+G      L  V   AS+ 
Sbjct: 517 LMAGIYFTTSLMTMFISNTATAVLLAPIA------LQSAMQIGVSPVPFLFAVTVGASMC 570

Query: 432 MILPVSTPPNSLAYSTGLIESKDMAKTGLVIGGIGLGIVYLMVFLL 477
              P STPPN+L    G     D  K GL +  I +GIV ++V  L
Sbjct: 571 FASPFSTPPNALVMPAGQYTFMDYIKVGLPL-QIIMGIVMILVLPL 615



 Score = 55.8 bits (133), Expect = 4e-12
 Identities = 48/215 (22%), Positives = 91/215 (42%), Gaps = 27/215 (12%)

Query: 51  AIFLLAALLWVLEPVPVFATSILIIALELVMISDKGLHGFRVPDPHHPLGELLKYTDIFS 110
           AI +L   + V + +PV   + ++IA  L++++                G        + 
Sbjct: 429 AIMVLMVAMMVFDFIPVAPVTAVMIAGILMVLT----------------GCFRNVEAAYK 472

Query: 111 AFSSPIIILFMGGFALAIAASKYELDNNLARVLLKPFG-HQPKYIMLGLMLITSVFSMFM 169
             +   I+L      +++A  K      ++  L+   G + P  +M G+   TS+ +MF+
Sbjct: 473 TINWESIVLIAAMLPMSLALEKTGASEYISNTLVSGLGSYGPIALMAGIYFTTSLMTMFI 532

Query: 170 SNTATTVMMLALLGPIVASAPKGDLGIKALVLCIPIAANTG-GIATPIGTPPNAIALQYL 228
           SNTAT V    LL PI   +    +G+  +     +        A+P  TPPNA+ +   
Sbjct: 533 SNTATAV----LLAPIALQSAM-QIGVSPVPFLFAVTVGASMCFASPFSTPPNALVMP-- 585

Query: 229 TGENSIDFLSWMMMGLPFVLVQLTIAWFLLQKLFP 263
                  F+ ++ +GLP  ++   +   +L  +FP
Sbjct: 586 --AGQYTFMDYIKVGLPLQIIMGIVMILVLPLIFP 618



 Score = 49.3 bits (116), Expect = 4e-10
 Identities = 40/166 (24%), Positives = 79/166 (47%), Gaps = 9/166 (5%)

Query: 284 MLVYITFALTIVLWMTTSWHGMNTYVVAIIPLAVFTLTGIMGKEELKQINWDVLWLVAGG 343
           ++  I   L+ + ++          + A++ L +F +  +   E L   +  V+ ++ G 
Sbjct: 2   LITIIILVLSAIFFVNGKIRSDLVALCALVALLIFQI--LTPDEALSGFSNSVVIMMIGL 59

Query: 344 IAIGIGLEQTGLAQALAHSI-DYQSLSPMLIVIALSLVCWLMANFMSNTATANLIMPIAA 402
             +G  + QTGLA+ ++  I      S + +   + LV   +  F+SNT T  L++PI  
Sbjct: 60  FVVGGAIFQTGLAKMISSRILKLAGNSEIRLFFLVMLVTSAIGAFVSNTGTVALMLPIVV 119

Query: 403 AIGTSMSSLEQVGGLQALLVVVAFSASL-GMILPVSTPPNSLAYST 447
           ++  S            LL+ +AF++S+ GM+  + TPPN +  +T
Sbjct: 120 SLAMSAKM-----NPSRLLMPLAFASSMGGMMTLIGTPPNLVIQNT 160