Pairwise Alignments

Query, 182 a.a., transcription termination/antitermination protein NusG from Vibrio cholerae E7946 ATCC 55056

Subject, 205 a.a., transcription antitermination protein NusG from Synechococcus elongatus PCC 7942

 Score =  136 bits (343), Expect = 2e-37
 Identities = 75/186 (40%), Positives = 107/186 (57%), Gaps = 13/186 (6%)

Query: 6   KKRWYVVQAFSGFEGRVAQSLREHIKMHGMEELFGEVLVPTEEVVEMRA-GQRRKSERKF 64
           K RWY VQ  SG E RV  +L + ++         +V +P   +V+++  G R+ +E K 
Sbjct: 20  KARWYAVQVASGCEKRVKATLEQRVQTLDAANRILQVEIPETPIVKLKKDGSRQSAEEKV 79

Query: 65  FPGYVLVQMIMNDESWHLVRSVPRVMGFIGGTSDRP----------APITDKEADAILNR 114
           FPGYVLV+MI++D++W +VR+ P V+ F+G    RP           P++  E   I  R
Sbjct: 80  FPGYVLVRMILDDDAWQIVRNTPHVINFVGAEQKRPYGRGRGHVKPMPLSPGEVGRIFKR 139

Query: 115 LEKASEAPRPKTMFEAGEVVRVNDGPFADFNGTVEEVDYEKSRLKVSVSIFGRATPVELE 174
            ++  + P  K     G+ + V  GPF DF GTV EV  E+S+LK  +SIFGR TPVELE
Sbjct: 140 AQE--QKPTVKIDLAEGDQILVLSGPFKDFEGTVIEVSPERSKLKALLSIFGRDTPVELE 197

Query: 175 FGQVEK 180
           F QV+K
Sbjct: 198 FNQVQK 203