Pairwise Alignments

Query, 182 a.a., transcription termination/antitermination protein NusG from Vibrio cholerae E7946 ATCC 55056

Subject, 183 a.a., transcription antitermination protein NusG (RefSeq) from Shewanella amazonensis SB2B

 Score =  302 bits (774), Expect = 2e-87
 Identities = 149/182 (81%), Positives = 167/182 (91%), Gaps = 2/182 (1%)

Query: 1   MSEAP--KKRWYVVQAFSGFEGRVAQSLREHIKMHGMEELFGEVLVPTEEVVEMRAGQRR 58
           M+EA   KKRWYVVQAFSG+EGRVA+SL EHIKMHGME+ FGEVLVPTEEVVEMRAGQRR
Sbjct: 1   MTEAKEAKKRWYVVQAFSGYEGRVAKSLVEHIKMHGMEQYFGEVLVPTEEVVEMRAGQRR 60

Query: 59  KSERKFFPGYVLVQMIMNDESWHLVRSVPRVMGFIGGTSDRPAPITDKEADAILNRLEKA 118
           KSERKFFPGYVLVQM MND+SWHLV+S+PRVMGFIGGTSDRPAPITD+EADAIL RL++ 
Sbjct: 61  KSERKFFPGYVLVQMEMNDDSWHLVKSIPRVMGFIGGTSDRPAPITDREADAILRRLQET 120

Query: 119 SEAPRPKTMFEAGEVVRVNDGPFADFNGTVEEVDYEKSRLKVSVSIFGRATPVELEFGQV 178
           +E+P  + M+E GEVVRV DGPFADFNGTVEEVDY+KSR+KVSV IFGR+TPVEL+F QV
Sbjct: 121 TESPTHRVMYEPGEVVRVVDGPFADFNGTVEEVDYDKSRVKVSVMIFGRSTPVELDFNQV 180

Query: 179 EK 180
           EK
Sbjct: 181 EK 182