Pairwise Alignments

Query, 182 a.a., transcription termination/antitermination protein NusG from Vibrio cholerae E7946 ATCC 55056

Subject, 145 a.a., transcriptional activator RfaH from Marinobacter adhaerens HP15

 Score = 44.7 bits (104), Expect = 7e-10
 Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 5/104 (4%)

Query: 49  VVEMRAGQRRKSERKFFPGYVLVQMIMNDESWHLVRSVPRVMGFIGGTSDRPAPITDKEA 108
           V ++R+G+R +     F GY+ +++   +++W+ +RS   ++  + G  + PA I     
Sbjct: 18  VEKVRSGKRTQRLEPLFAGYLFIKLKPGEQNWNKLRSTRGILRIV-GFGNTPATIDQTVI 76

Query: 109 DAILNRLEKASEAPRPKTMFEAGEVVRVNDGPFADFNGTVEEVD 152
           D I  RL   +     +   ++G+ V ++DGPF   N   +  D
Sbjct: 77  DQINARLASVT----TQGGLKSGQAVELDDGPFKGLNAIFQCYD 116