Pairwise Alignments

Query, 182 a.a., transcription termination/antitermination protein NusG from Vibrio cholerae E7946 ATCC 55056

Subject, 183 a.a., transcription antitermination protein NusG (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  206 bits (525), Expect = 1e-58
 Identities = 99/177 (55%), Positives = 131/177 (74%), Gaps = 1/177 (0%)

Query: 4   APKKRWYVVQAFSGFEGRVAQSLREHIKMHGMEELFGEVLVPTEEVVEMRAGQRRKSERK 63
           A K RWY+V  +SGFE RV Q++RE I+    ++   EV+VPTE+V+E+  G++R S RK
Sbjct: 7   ASKARWYIVHTYSGFENRVEQTIREMIRTGQSQDEIVEVVVPTEKVIELVKGEKRTSTRK 66

Query: 64  FFPGYVLVQMIMNDESWHLVRSVPRVMGFIGGTSDRPAPITDKEADAILNRLEKASEAPR 123
           F+PGYV+V+M M D SWHLV+S+P+V GF+GG  +RP P+ D EA+ IL  +E   E PR
Sbjct: 67  FYPGYVMVKMFMTDFSWHLVQSIPKVTGFVGG-KNRPTPMRDSEAERILAMMESRQEQPR 125

Query: 124 PKTMFEAGEVVRVNDGPFADFNGTVEEVDYEKSRLKVSVSIFGRATPVELEFGQVEK 180
           PK  F+ G+ VRV DGPF  FNG VE+V+Y+K +L+VSVSIFGR TPVEL+F QV K
Sbjct: 126 PKFNFDRGDEVRVIDGPFGGFNGVVEDVNYDKGKLRVSVSIFGRQTPVELDFVQVSK 182