Pairwise Alignments

Query, 182 a.a., transcription termination/antitermination protein NusG from Vibrio cholerae E7946 ATCC 55056

Subject, 177 a.a., NusG antitermination factor (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  186 bits (473), Expect = 2e-52
 Identities = 93/174 (53%), Positives = 123/174 (70%), Gaps = 1/174 (0%)

Query: 7   KRWYVVQAFSGFEGRVAQSLREHIKMHGMEELFGEVLVPTEEVVEMRAGQRRKSERKFFP 66
           KRWY V   S FE ++A+ ++  +   G+E+   EVLVPTEEV+E+R G++  +ER+F P
Sbjct: 3   KRWYSVSVLSNFEKKIAEQIKHAVAEAGLEDDIEEVLVPTEEVIEVRRGKKVTAERRFMP 62

Query: 67  GYVLVQMIMNDESWHLVRSVPRVMGFIGGTSDRPAPITDKEADAILNRLEKASEAPRPKT 126
           GYVLV+M M D+ +HL+ S+ RV GF+G    RP  + D E + ILNR+E+  EAPR   
Sbjct: 63  GYVLVRMEMTDQGYHLINSINRVTGFLG-PQGRPMAMRDDEVNQILNRVEEGQEAPRSLI 121

Query: 127 MFEAGEVVRVNDGPFADFNGTVEEVDYEKSRLKVSVSIFGRATPVELEFGQVEK 180
            F+ GE V V DGPF  F+G+VEEVD + +RLKV+VSIFGRATPVELEF QV K
Sbjct: 122 TFDIGEQVNVTDGPFEGFSGSVEEVDDDNNRLKVTVSIFGRATPVELEFTQVTK 175