Pairwise Alignments

Query, 182 a.a., transcription termination/antitermination protein NusG from Vibrio cholerae E7946 ATCC 55056

Subject, 185 a.a., transcription antitermination protein NusG from Caulobacter crescentus NA1000

 Score =  213 bits (541), Expect = 2e-60
 Identities = 99/177 (55%), Positives = 138/177 (77%), Gaps = 1/177 (0%)

Query: 5   PKKRWYVVQAFSGFEGRVAQSLREHIKMHGMEELFGEVLVPTEEVVEMRAGQRRKSERKF 64
           P  +WY+V A+S FE +VA+S+RE  K  G+EE F E+LVPTE+VVE+R G++  +ERKF
Sbjct: 9   PNHKWYIVHAYSNFEKKVAESIREQAKNQGLEENFSEILVPTEDVVEIRRGRKVNAERKF 68

Query: 65  FPGYVLVQMIMNDESWHLVRSVPRVMGFIGGTSDRPAPITDKEADAILNRLEKASEAPRP 124
           FPGYVLV+M ++DE++HL+++ P+V GF+G  S +P P+++KE   I+  +E+   AP+ 
Sbjct: 69  FPGYVLVKMNLSDEAYHLIKNTPKVTGFLGSGS-KPMPVSEKEVQRIIGTIEEGVAAPKA 127

Query: 125 KTMFEAGEVVRVNDGPFADFNGTVEEVDYEKSRLKVSVSIFGRATPVELEFGQVEKL 181
             ++E GE VRV DGPFA FNG+VE VD EK+RL+V+VSIFGRATPVELE+ QVEK+
Sbjct: 128 VVLYEVGENVRVTDGPFASFNGSVEYVDEEKARLRVTVSIFGRATPVELEYNQVEKI 184