Pairwise Alignments

Query, 182 a.a., transcription termination/antitermination protein NusG from Vibrio cholerae E7946 ATCC 55056

Subject, 185 a.a., transcription antitermination protein NusG from Burkholderia phytofirmans PsJN

 Score =  239 bits (609), Expect = 3e-68
 Identities = 111/185 (60%), Positives = 150/185 (81%), Gaps = 4/185 (2%)

Query: 1   MSEAPK----KRWYVVQAFSGFEGRVAQSLREHIKMHGMEELFGEVLVPTEEVVEMRAGQ 56
           MS+ P     KRWYVV A+SG E  V ++L+E I+  GM++ FG++LVPTEEVVE++ G 
Sbjct: 1   MSDTPASPSGKRWYVVHAYSGMEKSVQRALQERIERAGMQDQFGQILVPTEEVVEVKGGH 60

Query: 57  RRKSERKFFPGYVLVQMIMNDESWHLVRSVPRVMGFIGGTSDRPAPITDKEADAILNRLE 116
           +  +ER+FFPGYVLV+M M DE+WHLV++  +V GF+GG  +RP+PI+ +E + I+++++
Sbjct: 61  KSVTERRFFPGYVLVEMEMTDETWHLVKNTAKVTGFVGGARNRPSPISPREVEKIMSQMQ 120

Query: 117 KASEAPRPKTMFEAGEVVRVNDGPFADFNGTVEEVDYEKSRLKVSVSIFGRATPVELEFG 176
           +  E PRPKT+FE GE+VRV DGPF DFNG+VEEV+YEKSR++VSV+IFGRATPVELEFG
Sbjct: 121 EGVEKPRPKTLFEVGEMVRVKDGPFTDFNGSVEEVNYEKSRVRVSVTIFGRATPVELEFG 180

Query: 177 QVEKL 181
           QVEKL
Sbjct: 181 QVEKL 185