Pairwise Alignments

Query, 182 a.a., transcription termination/antitermination protein NusG from Vibrio cholerae E7946 ATCC 55056

Subject, 183 a.a., transcription antitermination protein nusG (RefSeq) from Shewanella sp. ANA-3

 Score =  293 bits (749), Expect = 2e-84
 Identities = 143/182 (78%), Positives = 165/182 (90%), Gaps = 2/182 (1%)

Query: 1   MSEAP--KKRWYVVQAFSGFEGRVAQSLREHIKMHGMEELFGEVLVPTEEVVEMRAGQRR 58
           M+EA   KKRWYVVQAFSG+EGRV +SL E+IKMHGME+ FGEVLVPTEEV+EMRAGQRR
Sbjct: 1   MTEAKEAKKRWYVVQAFSGYEGRVCKSLIEYIKMHGMEQYFGEVLVPTEEVIEMRAGQRR 60

Query: 59  KSERKFFPGYVLVQMIMNDESWHLVRSVPRVMGFIGGTSDRPAPITDKEADAILNRLEKA 118
           KSERKFFPGYVLVQM MND+SWHLV+S+PRV+GFIGGTSDRPAPI+D+EADAIL RL++ 
Sbjct: 61  KSERKFFPGYVLVQMEMNDDSWHLVKSIPRVLGFIGGTSDRPAPISDREADAILRRLQET 120

Query: 119 SEAPRPKTMFEAGEVVRVNDGPFADFNGTVEEVDYEKSRLKVSVSIFGRATPVELEFGQV 178
           + +P  + +FE GEVVRV DGPFADFNGTVEEVDY+KSR+KVSV IFGR+TPVEL+F QV
Sbjct: 121 TASPTHRVIFEPGEVVRVCDGPFADFNGTVEEVDYDKSRVKVSVMIFGRSTPVELDFNQV 180

Query: 179 EK 180
           EK
Sbjct: 181 EK 182