Pairwise Alignments

Query, 394 a.a., elongation factor Tu-A from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., selenocysteine-specific elongation factor SelB from Pseudomonas stutzeri RCH2

 Score =  139 bits (350), Expect = 2e-37
 Identities = 122/381 (32%), Positives = 177/381 (46%), Gaps = 37/381 (9%)

Query: 15  VGTIGHVDHGKTTLTAAICTVLAKVYGGKARDFASIDNAPEERERGITINTSHVEYDTPN 74
           VGT GH+DHGKT L  A    L    G + R         EERERGITI+  +V  D   
Sbjct: 3   VGTAGHIDHGKTALLQA----LTGQQGDRRR---------EERERGITIDLGYVYADLGE 49

Query: 75  RHYA-HVDCPGHADYVKNMITGAAQMDGGILVVAATDGRMPQTREHILLGRQVGIPYIIV 133
                 +D PGH  +V NM+ GA+ +D  +LVVAA DG MPQTREH+ +   +GI   +V
Sbjct: 50  GSLTGFIDVPGHERFVHNMLAGASGIDCVLLVVAADDGVMPQTREHLAIVELLGIRRALV 109

Query: 134 FMNKCDMVDDEELLELVEMEVRELLSEYDFPGDDLPVIQGSALGALNGEAQWEAKIVELA 193
            + K D V+   + E V+ ++  LL      G   P+   S++     +A   A I E A
Sbjct: 110 ALTKIDRVETARIAE-VQRQIENLLVTGPLAG--APIFPVSSIRGDGVDALRTALIEEAA 166

Query: 194 EALDTYIPEPERAVDMAFLMPIEDVFSIQGRGTVVTGRIERGILKVGDEVAIVGIKETVK 253
                      R+    F + I+  FS+ G G VVTG    G +++GDE+ +    + V+
Sbjct: 167 RT-------AARSASGHFRLAIDRAFSVTGAGVVVTGTAFAGRVRIGDELLLGPTGKRVR 219

Query: 254 TTCTGVEMFRKLLDEGRAGENVGALLRGTKR--EEVERGQVLAKPGSITPHTKFESEVYV 311
               G+    +  DE  AG+ V   L G +   E++ RG  L  P   TP  + + +  +
Sbjct: 220 V--RGLHAQNREADEAHAGQRVALNLAGERLAVEQIHRGDWLLHPLLHTPTQRIDIDFKL 277

Query: 312 LSKDEGGRHTPFFKGYRP-QFYFRTTDVTGSIELPEGVEMVMPGDNVKMVVDLIAPIAMD 370
           L    G  H    K + P   +    DVT  + L E   +  PG++    + L AP    
Sbjct: 278 L---PGEAHE--LKHWAPVHVHLGAQDVTARVALLEDASLA-PGEHAFAQLLLNAPSHAV 331

Query: 371 EGLRFAIRE--GGRTVGAGVV 389
            G R  +R+    RT+G G V
Sbjct: 332 HGDRIVLRDQSAQRTLGGGRV 352