Pairwise Alignments

Query, 394 a.a., elongation factor Tu-A from Vibrio cholerae E7946 ATCC 55056

Subject, 666 a.a., selenocysteine-specific elongation factor from Sinorhizobium meliloti 1021

 Score =  124 bits (310), Expect = 1e-32
 Identities = 107/379 (28%), Positives = 172/379 (45%), Gaps = 38/379 (10%)

Query: 15  VGTIGHVDHGKTTLTAAICTVLAKVYGGKARDFASIDNAPEERERGITINTSHVEYD-TP 73
           VGT GH+DHGKTTL  A+  V               D   EE+ RGITI+          
Sbjct: 3   VGTAGHIDHGKTTLVKALTGV-------------DTDRLKEEKARGITIDLGFAYARFAK 49

Query: 74  NRHYAHVDCPGHADYVKNMITGAAQMDGGILVVAATDGRMPQTREHILLGRQVGIPYIIV 133
           +     VD PGH  ++  M+ GA  +D  +LVVAA DG  PQT EH+ +   +G+   +V
Sbjct: 50  DAVTGFVDVPGHERFIHTMLAGAGGIDYAMLVVAADDGIKPQTLEHLAILDLLGVSRGLV 109

Query: 134 FMNKCDMVDDEELLELVEMEVRELLSEYDF-PGDDLPVIQGSALGALNGEAQWEAKIVEL 192
            + K D+ D   L  L + E+  +LS       + LPV   +  G    + +  A   E 
Sbjct: 110 AITKADLADPARLENLTD-EIGAVLSSTSLRDAEILPVSVAAGQGIELLKERLAA--AEC 166

Query: 193 AEALDTYIPEPERAVDMAFLMPIEDVFSIQGRGTVVTGRIERGILKVGDEVAIVGIKETV 252
           A A          AV   F + ++  F++ G GTVVTG +  G + VGD+V +     + 
Sbjct: 167 ATAAS--------AVGGRFRLAVDRSFTLSGAGTVVTGTVLSGSVGVGDQVTVSPAGRSA 218

Query: 253 KTTCTGVEMFRKLLDEGRAGENVGALL--RGTKREEVERGQVLAKPGSITPHTKFESEVY 310
           +     +    +  + G AG+     L   G  ++ + RG ++  P    P  + ++++ 
Sbjct: 219 RV--RSIHAQNQRAERGFAGQRCALNLAGEGISKDAITRGDMVVDPHLHAPSDRLDADLS 276

Query: 311 VLSKDEGGRHTPFFKGYRPQFYFRTTDVTGSIELPEGVEMVMPGDNVKMVVDLIAPIAMD 370
           VL  +      P  + +  +F+  + +    I   EG   ++PG+  ++ + L  PIA  
Sbjct: 277 VLESET----KPIGEWFSARFHHASAETGIRIVPLEG--PLLPGERRRVQLVLDRPIAAA 330

Query: 371 EGLRFAIRE--GGRTVGAG 387
            G RF +R+    RT+G G
Sbjct: 331 VGDRFILRDVSARRTIGGG 349