Pairwise Alignments

Query, 394 a.a., elongation factor Tu-A from Vibrio cholerae E7946 ATCC 55056

Subject, 650 a.a., selenocysteine-specific translation elongation factor (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  151 bits (382), Expect = 5e-41
 Identities = 124/388 (31%), Positives = 181/388 (46%), Gaps = 45/388 (11%)

Query: 13  VNVGTIGHVDHGKTTLTAAICTVLAKVYGGKARDFASIDNAPEERERGITINTSHVEYDT 72
           V +GT GH+DHGKT+L  A+  +               D   EE+ RGITI       D 
Sbjct: 3   VVMGTAGHIDHGKTSLVRALTGI-------------DCDRLEEEKRRGITIELGFAFCDL 49

Query: 73  PNR-----HYAHVDCPGHADYVKNMITGAAQMDGGILVVAATDGRMPQTREHILLGRQVG 127
           P           VD PGH  +VKNM+ GA+ +D  +LV+AA +G MPQTREH+ +   +G
Sbjct: 50  PGAGAGVGRLGIVDVPGHERFVKNMVAGASGIDFVMLVIAADEGVMPQTREHLEICSLLG 109

Query: 128 IPYIIVFMNKCDMVDDEELLELVEMEVRELLSEYDFPGDDL-PV--IQGSALGALNGE-A 183
           I + +V + K DMV D E LEL + +V   L+     G  + PV    G  L AL    A
Sbjct: 110 IRHGLVALTKVDMV-DPEWLELAQEDVAGFLAGTFLEGAPIFPVSSTTGQGLDALREHLA 168

Query: 184 QWEAKIVELAEALDTYIPEPERAVDMAFLMPIEDVFSIQGRGTVVTGRIERGILKVGDEV 243
             E ++             P R  D+ F +P++ VF+++G GTVVTG +  G +KVGDEV
Sbjct: 169 MLEREL------------RPVRRSDL-FRLPVDRVFTMKGHGTVVTGTMVSGSVKVGDEV 215

Query: 244 AIVGIKETVKTTCTGVEMFRKLLDEGRAGENVGALLRGTKREEVERGQVLAKPGSITPHT 303
            +       +T    ++     +D   AG      ++G   E+V+RG VLA PG++ P  
Sbjct: 216 VL--YPGGAQTKVRSLQSHGGPVDVAPAGRRTAVNVQGLDVEDVQRGDVLAHPGTLFPSL 273

Query: 304 KFESEVYVLSKDEGGRHTPFFKGYRPQFYFRTTDVTGSIELPEGVEMVMPGDNVKMVVDL 363
           ++   +  LS       TP        F+    +V   +  P+  + + PG+     V  
Sbjct: 274 RWMVRLTCLS----SAPTPLKNRTEVHFHHGAREVLARLYFPDR-DKLAPGETALCEVRF 328

Query: 364 IAPIAMDEGLRFAIREGG--RTVGAGVV 389
             P+    G R  +R     RTV  G V
Sbjct: 329 TEPMVGVAGDRCVVRSFSPLRTVAGGAV 356