Pairwise Alignments

Query, 394 a.a., elongation factor Tu-A from Vibrio cholerae E7946 ATCC 55056

Subject, 428 a.a., translation elongation factor EF-1 subunit alpha from Methanococcus maripaludis S2

 Score =  185 bits (469), Expect = 2e-51
 Identities = 145/434 (33%), Positives = 213/434 (49%), Gaps = 58/434 (13%)

Query: 8   RTKPHVNVGTIGHVDHGKTTLTA-------AICTVL-------AKVYGGKARDFASI-DN 52
           + KP +NV  IGHVD GK+T          AI   L       A+  G    +FA + D 
Sbjct: 3   KEKPILNVAFIGHVDAGKSTTVGRLLLDGGAIDPQLIVRLRKEAEEKGKAGFEFAYVMDG 62

Query: 53  APEERERGITINTSHVEYDTPNRHYAHVDCPGHADYVKNMITGAAQMDGGILVVAATD-- 110
             EERERG+TI+ +H ++ T       VDCPGH D++KNMITGA+Q D  +LVV   D  
Sbjct: 63  LKEERERGVTIDVAHKKFPTAKYEVTIVDCPGHRDFIKNMITGASQADAAVLVVNVDDAK 122

Query: 111 -GRMPQTREHILLGRQVGIPYIIVFMNKCDMVD--DEELLELVEMEVRELLSEYDFPGDD 167
            G  PQTREH+ L R +GI  + V +NK D V+  + +  E+ +M   +LL    F  D+
Sbjct: 123 SGIQPQTREHVFLSRTLGITQLAVAINKMDTVNFSEADYNEMKKMLGDQLLKMVGFNPDN 182

Query: 168 LPVIQGSALGALNGEAQWE----AKIVELAEALDTYIPEPERAVDMAFLMPIEDVFSIQG 223
           +  I  ++L   N   + E         LA+ +D + P PE+   +   +PI+DV+SI G
Sbjct: 183 IDFIPVASLLGDNVFKKSENTPWYNGPTLAQVIDGFQP-PEKPTTLPLRLPIQDVYSITG 241

Query: 224 RGTVVTGRIERGILKVGDEVAI--VGIKETVKTTCTGVEMFRKLLDEGRAGENVGALLRG 281
            GTV  GR+E GI+K GD+V     G    +KT    VEM  + L     G+N+G  +RG
Sbjct: 242 VGTVPVGRVETGIIKPGDKVVFEPAGAVGEIKT----VEMHHEQLPSAEPGDNIGFNVRG 297

Query: 282 TKREEVERGQVLA-KPGSITPHTKFESEVYVLSKDEGGRHTPFFKGYRPQFYFRTTDV-- 338
             +++++RG VL       T    F +++ VL        +    GY P F+  T  +  
Sbjct: 298 VGKKDIKRGDVLGHTTNPPTVAADFTAQIVVLQ-----HPSVMTVGYTPVFHAHTAQIAC 352

Query: 339 ------------TGSIELPEGVEMVMPGDNVKMVVDLIAPIAMDEGL------RFAIREG 380
                       TG + L E  + +  GD   + +    P+ M+         RFAIR+ 
Sbjct: 353 TFMELQKKLNPATGEV-LEENPDFLKAGDAAIVKLMPTKPLVMESVKEIPQLGRFAIRDM 411

Query: 381 GRTVGAGVVAKIIA 394
           G TV AG+  ++ A
Sbjct: 412 GMTVAAGMAIQVTA 425