Pairwise Alignments

Query, 394 a.a., elongation factor Tu-A from Vibrio cholerae E7946 ATCC 55056

Subject, 468 a.a., selenocysteine-specific translation elongation factor from Methanococcus maripaludis JJ

 Score =  139 bits (351), Expect = 1e-37
 Identities = 90/286 (31%), Positives = 152/286 (53%), Gaps = 28/286 (9%)

Query: 12  HVNVGTIGHVDHGKTTLTAAICTVLAKVYGGKARDFASIDNAPEERERGITINTSHVEYD 71
           ++N+G  GH+DHGKTTL+  +  + +          ++ D  PE ++RGITI+     + 
Sbjct: 5   NINLGIFGHIDHGKTTLSKVLTEIAST---------SAHDKLPESQKRGITIDIGFSAFK 55

Query: 72  TPNRHYAHVDCPGHADYVKNMITGAAQMDGGILVVAATDGRMPQTREHILLGRQVGIPYI 131
             N     VD PGHAD ++ +++ A  +D  ++VV A +G   QT EH+L+     IP I
Sbjct: 56  LENYRITLVDAPGHADLIRAVVSAADIIDLALIVVDAKEGPKTQTGEHMLILDHFNIP-I 114

Query: 132 IVFMNKCDMVDDEELLELVEMEVRELL-SEYDFPGDD-LPVIQGSALGALNGEAQWEAKI 189
           IV + K D    EE ++  EM ++ +L S ++      +P+   +  G           +
Sbjct: 115 IVVITKSDNAGTEE-IKRTEMIMKSILQSTHNLKNSSIIPISAKTGFG-----------V 162

Query: 190 VELAEALDTYIPEPE--RAVDMAFLMPIEDVFSIQGRGTVVTGRIERGILKVGDEVAIVG 247
            EL   + T +   E  R  +  F MP++  F I+G GTVVTG I +GI+KVGDE+ ++ 
Sbjct: 163 DELKNLIITTLNNAEIIRNTESYFKMPLDHAFPIKGAGTVVTGTINKGIVKVGDELKVLP 222

Query: 248 IKETVKTTCTGVEMFRKLLDEGRAGENVGALLRGTKREEVERGQVL 293
           I   + T    ++ F++ + E +AG+ VG  ++G   +++ RG +L
Sbjct: 223 I--NMSTKVRSIQYFKESVMEAKAGDRVGMAIQGVDAKQIYRGCIL 266