Pairwise Alignments

Query, 394 a.a., elongation factor Tu-A from Vibrio cholerae E7946 ATCC 55056

Subject, 428 a.a., translation elongation factor EF-1 subunit alpha from Methanococcus maripaludis JJ

 Score =  186 bits (472), Expect = 1e-51
 Identities = 146/435 (33%), Positives = 213/435 (48%), Gaps = 60/435 (13%)

Query: 8   RTKPHVNVGTIGHVDHGKTTLTA-------AICTVL-------AKVYGGKARDFASI-DN 52
           + KP +NV  IGHVD GK+T          AI   L       A+  G    +FA + D 
Sbjct: 3   KEKPILNVAFIGHVDAGKSTTVGRLLLDGGAIDPQLIVRLRKEAEEKGKAGFEFAYVMDG 62

Query: 53  APEERERGITINTSHVEYDTPNRHYAHVDCPGHADYVKNMITGAAQMDGGILVVAATD-- 110
             EERERG+TI+ +H ++ T       VDCPGH D++KNMITGA+Q D  +LVV   D  
Sbjct: 63  LKEERERGVTIDVAHKKFPTAKYEVTIVDCPGHRDFIKNMITGASQADAAVLVVNVDDAK 122

Query: 111 -GRMPQTREHILLGRQVGIPYIIVFMNKCDMVD--DEELLELVEMEVRELLSEYDFPGDD 167
            G  PQTREH+ L R +GI  + V +NK D V+  + +  E+ +M   +LL    F  D+
Sbjct: 123 SGIQPQTREHVFLSRTLGITQLAVAINKMDTVNFSEADYNEMKKMLGDQLLKMVGFNPDN 182

Query: 168 LPVIQGSALGALN-----GEAQWEAKIVELAEALDTYIPEPERAVDMAFLMPIEDVFSIQ 222
           +  I  ++L   N      +  W      LAE +D + P PE+   +   +PI+DV+SI 
Sbjct: 183 INFIPVASLLGDNVFKKSDKTPW-YNGPTLAEVIDGFQP-PEKPTTLPLRLPIQDVYSIT 240

Query: 223 GRGTVVTGRIERGILKVGDEVAI--VGIKETVKTTCTGVEMFRKLLDEGRAGENVGALLR 280
           G GTV  GR+E GI+K GD+V     G    +KT    VEM  + L     G+N+G  +R
Sbjct: 241 GVGTVPVGRVETGIIKPGDKVVFEPAGAVGEIKT----VEMHHEQLPSAEPGDNIGFNVR 296

Query: 281 GTKREEVERGQVLA-KPGSITPHTKFESEVYVLSKDEGGRHTPFFKGYRPQFYFRTTDV- 338
           G  +++++RG VL       T    F +++ VL        +    GY P F+  T  + 
Sbjct: 297 GVGKKDIKRGDVLGHTTNPPTVAADFTAQIVVLQ-----HPSVMTVGYTPVFHAHTAQIA 351

Query: 339 -------------TGSIELPEGVEMVMPGDNVKMVVDLIAPIAMDEGL------RFAIRE 379
                        TG + L E  + +  GD   + +    P+ M+         RFAIR+
Sbjct: 352 CTFMELQKKLNPATGEV-LEENPDFLKAGDAAIVKLMPTKPLVMESVKEIPQLGRFAIRD 410

Query: 380 GGRTVGAGVVAKIIA 394
            G TV AG+  ++ A
Sbjct: 411 MGMTVAAGMAIQVTA 425