Pairwise Alignments

Query, 394 a.a., elongation factor Tu-A from Vibrio cholerae E7946 ATCC 55056

Subject, 394 a.a., translation elongation factor Tu (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  699 bits (1803), Expect = 0.0
 Identities = 342/394 (86%), Positives = 366/394 (92%)

Query: 1   MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAICTVLAKVYGGKARDFASIDNAPEERERG 60
           M+K KFER+KPHVNVGTIGHVDHGKTTLTAAI  VLAK YGG+A+DF+ IDNAPEERERG
Sbjct: 1   MAKAKFERSKPHVNVGTIGHVDHGKTTLTAAISHVLAKTYGGEAKDFSQIDNAPEERERG 60

Query: 61  ITINTSHVEYDTPNRHYAHVDCPGHADYVKNMITGAAQMDGGILVVAATDGRMPQTREHI 120
           ITINTSH+EYDTP+RHYAHVDCPGHADYVKNMITGAAQMDG ILVVA+TDG MPQTREHI
Sbjct: 61  ITINTSHIEYDTPSRHYAHVDCPGHADYVKNMITGAAQMDGAILVVASTDGPMPQTREHI 120

Query: 121 LLGRQVGIPYIIVFMNKCDMVDDEELLELVEMEVRELLSEYDFPGDDLPVIQGSALGALN 180
           LL RQVG+P+IIVFMNKCDMVDD ELLELVEMEVRELLSEYDFPGDDLPVIQGSAL AL 
Sbjct: 121 LLSRQVGVPFIIVFMNKCDMVDDAELLELVEMEVRELLSEYDFPGDDLPVIQGSALKALE 180

Query: 181 GEAQWEAKIVELAEALDTYIPEPERAVDMAFLMPIEDVFSIQGRGTVVTGRIERGILKVG 240
           GE +WEAKI+ELA ALD+YIPEPER +D  FLMPIEDVFSI GRGTVVTGR+ERGI++VG
Sbjct: 181 GEPEWEAKILELAAALDSYIPEPERDIDKPFLMPIEDVFSISGRGTVVTGRVERGIVRVG 240

Query: 241 DEVAIVGIKETVKTTCTGVEMFRKLLDEGRAGENVGALLRGTKREEVERGQVLAKPGSIT 300
           DEV IVGI+ T KTTCTGVEMFRKLLDEGRAGEN G LLRGTKR++VERGQVL+KPGSI 
Sbjct: 241 DEVEIVGIRTTTKTTCTGVEMFRKLLDEGRAGENCGILLRGTKRDDVERGQVLSKPGSIN 300

Query: 301 PHTKFESEVYVLSKDEGGRHTPFFKGYRPQFYFRTTDVTGSIELPEGVEMVMPGDNVKMV 360
           PHT FESEVYVLSK+EGGRHTPFFKGYRPQFYFRTTDVTG+IELPEGVEMVMPGDN+KM 
Sbjct: 301 PHTTFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNIKMK 360

Query: 361 VDLIAPIAMDEGLRFAIREGGRTVGAGVVAKIIA 394
           V LI PIAMDEGLRFAIREGGRTVGAGVVAKI A
Sbjct: 361 VTLICPIAMDEGLRFAIREGGRTVGAGVVAKIFA 394