Pairwise Alignments

Query, 394 a.a., elongation factor Tu-A from Vibrio cholerae E7946 ATCC 55056

Subject, 642 a.a., selenocysteine-specific translation elongation factor (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  156 bits (394), Expect = 2e-42
 Identities = 125/382 (32%), Positives = 186/382 (48%), Gaps = 37/382 (9%)

Query: 13  VNVGTIGHVDHGKTTLTAAICTVLAKVYGGKARDFASIDNAPEERERGITINTSHVEYDT 72
           V +GT GH+DHGKT+L  A+  +               D   EE+ RGITI       D 
Sbjct: 3   VIMGTAGHIDHGKTSLVRALTGI-------------DCDRLDEEKRRGITIELGFAFCDL 49

Query: 73  PNR-HYAHVDCPGHADYVKNMITGAAQMDGGILVVAATDGRMPQTREHILLGRQVGIPYI 131
           P       VD PGH  +V+NM+ GA+ +D  +LV+AA +G MPQTREH+ +   +GI + 
Sbjct: 50  PGGGRLGVVDVPGHEKFVRNMVAGASGVDFVMLVIAADEGVMPQTREHLEICSLLGIRHG 109

Query: 132 IVFMNKCDMVDDEELLELVEMEVRELLSEYDFPGDDLPVIQGSALGALNGEAQWEAKIVE 191
           +V + K DMV D + LEL + +V   L+     G   P+     + A+ G+      +  
Sbjct: 110 LVALTKVDMV-DADWLELAQDDVAGFLAGTFLEG--APIF---PVSAVTGQG-----LDT 158

Query: 192 LAEALDTYIPE--PERAVDMAFLMPIEDVFSIQGRGTVVTGRIERGILKVGDEVAIVGIK 249
           L E L T   E  PER  D+ F +P++ VF+++G GTVVTG +  G LKVGD+V +    
Sbjct: 159 LREHLATLERELRPERRTDL-FRLPVDRVFTMRGHGTVVTGTMISGSLKVGDDVVLYPEG 217

Query: 250 ETVKTTCTGVEMFRKLLDEGRAGENVGALLRGTKREEVERGQVLAKPGSITPHTKFESEV 309
            T K    G++     +D+  AG      L+G    EV+RG+VLA PG++ P  +++  +
Sbjct: 218 RTSKV--RGLQSHGGPVDKALAGRRTAVNLQGVDVAEVQRGEVLALPGTLFPAQRWDVRL 275

Query: 310 YVLSKDEGGRHTPFFKGYRPQFYFRTTDVTGSIELPEGVEMVMPGDNVKMVVDLIAPIAM 369
             LS        P        F+    +V   +   +  + + PG+     V    P+  
Sbjct: 276 TCLS----SAARPLRNRTEVHFHHGAREVLARLHFHDR-DRLNPGETALCQVRFTEPMVG 330

Query: 370 DEGLRFAIREGG--RTVGAGVV 389
             G R  +R     RTV  GVV
Sbjct: 331 VFGDRCVVRTFSPLRTVAGGVV 352