Pairwise Alignments

Query, 320 a.a., bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., birA bifunctional protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  296 bits (757), Expect = 6e-85
 Identities = 154/312 (49%), Positives = 211/312 (67%), Gaps = 3/312 (0%)

Query: 7   KLAILKQLADGDFHSGEVLGAQLGISRAAISKHIQGIRDWGVDVFRVQGKGYQLAQAMTL 66
           K  IL  L++  F SGE L  QLGISRAA+SKH+  + D+GV +F V+G+GY+LA  ++L
Sbjct: 8   KRQILGLLSNEHFVSGEELATQLGISRAAVSKHVDTLEDYGVAIFSVKGRGYKLANPISL 67

Query: 67  LDQSVIQSQVNNPVELHPIIGSTNQYLLDHVETLVSGTVCLAEYQASGRGRRGRHWVSPF 126
           +D S +   ++N       I STN ++L H   L SG +C+AEYQ++GRGRRGR WVSP+
Sbjct: 68  IDSSRLIQAIDNRCFYFDEIPSTNGFMLGHTSELKSGDLCVAEYQSAGRGRRGRTWVSPY 127

Query: 127 GANLYLSIYWRLDAGMAAAMGLSLVVGVAIVEALEAMGVDGVKLKWPNDLYYQDKKLAGI 186
           G +LY S +W    GMA AMGLSLVV  ++VE L++ GV+ V +KWPND+Y   KKLAGI
Sbjct: 128 GHHLYFSQFWSFPQGMAQAMGLSLVVACSLVEVLKSFGVENVGVKWPNDIYLNFKKLAGI 187

Query: 187 LVEMSGQAGAAAHLVIGMGINLAMRDNEG-NIDQPWISLAEVTGQSRIDRNALAINLIAA 245
           L+EMSGQA +   L+IG+G+N+AM + +G  IDQPW  L+ +T     ++  L I L   
Sbjct: 188 LIEMSGQADSECQLIIGIGVNMAMSEGQGKGIDQPWSDLSGLT--CIPNKTDLVIALHKQ 245

Query: 246 LDRTLRQYEISGMQNFVERWNRWDNFIGRPVKLLMGANEVRGIERGIDEHGGVLLETEEG 305
           L R ++ +E  G+  F  RW   D F G+ ++LLMG N + GI RGIDE G VLLE  +G
Sbjct: 246 LKRDIQLFEREGLVAFKTRWQEADLFHGKEIRLLMGENHLDGICRGIDEQGAVLLENADG 305

Query: 306 LKSFIGGEISLR 317
           ++++IGGEISLR
Sbjct: 306 IQAYIGGEISLR 317