Pairwise Alignments

Query, 613 a.a., 4-hydroxy-3-polyprenylbenzoate decarboxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 488 a.a., UbiD family decarboxylases from Pseudomonas stutzeri RCH2

 Score =  720 bits (1858), Expect = 0.0
 Identities = 340/459 (74%), Positives = 392/459 (85%)

Query: 1   MNFKDLRDFLDYLEQRGELKRITHPIDPHYEMTEISDRTLRAKGPALLFENPLGYDFPVL 60
           M ++DLRDF+  LE+RGELKRIT  + P  EMTEI DRTLR +GPALLFENP G+D PVL
Sbjct: 1   MQYRDLRDFISGLEKRGELKRITTAVSPVLEMTEICDRTLRKQGPALLFENPTGFDMPVL 60

Query: 61  TNLFGTPERVAMGMGRQQVQELRDVGQWLAYLKEPEPPRGLKELIEKLPVFKQVLNMPVK 120
            NLFGTP+RVA+GMG + V ELR++G+ LA+LKEPEPP+GLK+   KLP++K+V++M  K
Sbjct: 61  GNLFGTPQRVALGMGAEDVSELREIGKLLAFLKEPEPPKGLKDAWSKLPIYKKVISMAPK 120

Query: 121 RLRRAPCQEIVWQGDAVDLDKIPVMSCWPDDVAPLLTWGLTITRGPHKKRQNLGIYRQQK 180
            L+ APC E++ +GD VDL KIPV  CWP D APL+TWGLTIT+GP+K+RQNLGIYRQQ 
Sbjct: 121 VLKDAPCHEVIIEGDDVDLGKIPVQHCWPGDAAPLITWGLTITKGPNKERQNLGIYRQQV 180

Query: 181 IARNKVIMRWLAHRGGALDLRDWMEKHPGEPFPVSVAFGADPATILGAVTPVPDTLSEYA 240
           I RNKVIMRWL+HRGGALD R+W EK+P  P+PV+VA GADPATILGAVTPVPDTLSEYA
Sbjct: 181 IGRNKVIMRWLSHRGGALDFREWCEKYPERPYPVAVALGADPATILGAVTPVPDTLSEYA 240

Query: 241 FAGLLRGSRTEVVKSISNDLEVPASAEIVLEGYIDPNEFADEGPYGDHTGYYNEVERHHV 300
           FAGLLRGSRTE+VK+I +DL+VPA AEIVLEG+I P E ADEGPYGDHTGYYNEV+R  V
Sbjct: 241 FAGLLRGSRTELVKAIGSDLQVPAYAEIVLEGHIYPGEMADEGPYGDHTGYYNEVDRFPV 300

Query: 301 FTVTHVTMRNKPIYHSTYTGRPPDEPAVLGVALNEVFVPILQKQFPEIADFYLPPEGCSY 360
           FTV  +T R  PIYHSTYTGRPPDEPA+LGVALNEVFVPILQKQFPEI DFYLPPEGCSY
Sbjct: 301 FTVERITQRKNPIYHSTYTGRPPDEPAILGVALNEVFVPILQKQFPEIVDFYLPPEGCSY 360

Query: 361 RMAIVTLKKQYPGHAKRVMLGVWSFLRQFMYTKFVIVCDEQVNARDWPQVIAAMVNHMSP 420
           RMA+VT+KKQYPGHAKRVMLGVWSFLRQFMYTKFVIV D+ +NARDW  VI A+   M P
Sbjct: 361 RMAVVTMKKQYPGHAKRVMLGVWSFLRQFMYTKFVIVTDDDINARDWNDVIWAITTRMDP 420

Query: 421 LRDTLFIEHTPIDSLDFASPVVGLGSKIGLDATAKWPAE 459
            RDT+ I++TPID LDFASP+ GLGSK+GLDAT KWP E
Sbjct: 421 KRDTVMIDNTPIDYLDFASPISGLGSKMGLDATHKWPGE 459



 Score =  101 bits (251), Expect = 8e-26
 Identities = 54/141 (38%), Positives = 80/141 (56%), Gaps = 16/141 (11%)

Query: 488 DVLDVALP-EAANDKLVLLLINKQEAGQAQQLLQRVVDKLNGDSPLKFVILCDDDVNIHD 546
           +++D  LP E  + ++ ++ + KQ  G A++++  V   L      KFVI+ DDD+N  D
Sbjct: 347 EIVDFYLPPEGCSYRMAVVTMKKQYPGHAKRVMLGVWSFLRQFMYTKFVIVTDDDINARD 406

Query: 547 WNDVIWAMTTRMDPARDSLRIVGQDL---------------ICFDATNKLPDEVEREWGT 591
           WNDVIWA+TTRMDP RD++ I    +               +  DAT+K P E  REWG 
Sbjct: 407 WNDVIWAITTRMDPKRDTVMIDNTPIDYLDFASPISGLGSKMGLDATHKWPGETNREWGR 466

Query: 592 PIRKDPKLVAKIDSLWDELGI 612
            I +DP +  ++D LW +LGI
Sbjct: 467 AIVQDPAVKQRVDELWSQLGI 487