Pairwise Alignments

Query, 613 a.a., 4-hydroxy-3-polyprenylbenzoate decarboxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 507 a.a., Carboxylyase-related protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  545 bits (1404), Expect = e-159
 Identities = 273/472 (57%), Positives = 336/472 (71%), Gaps = 15/472 (3%)

Query: 1   MNFKDLRDFLDYLEQRGELKRITHPIDPHYEMTEISDRTLRAKGPALLFEN---PLG--Y 55
           M F  LRDF+  LE+   L R+  P+ P  EMTEI  R L  KGPA+LFEN   P G  Y
Sbjct: 1   MPFDSLRDFMALLEREHNLVRVRAPVSPVLEMTEIQTRLLDEKGPAVLFENVRRPDGSAY 60

Query: 56  DFPVLTNLFGTPERVAMGMGRQQVQELRDVGQWLAYLKEPEPPRGLKELIEKLPVFKQVL 115
             P+L N+FGT ERVA+GM R   Q LR+VG+ LA+LK+PEPP G +E +E LP+ K VL
Sbjct: 61  AMPMLVNMFGTVERVALGMDRTPAQ-LREVGEMLAFLKQPEPPGGWREALEMLPLLKTVL 119

Query: 116 NMPVKRLRRAPCQEIVWQGDAVDLDKIPVMSCWPDDVAPLLTWGLTITRGPHKKRQ---- 171
            M  + + +APCQ++V +G  +DL  +P+ SCWP + APL+TW + +T+GP    +    
Sbjct: 120 AMKPRTVSKAPCQQVVLKGKDIDLGLLPIQSCWPGEPAPLITWPVVVTQGPQASGKGARR 179

Query: 172 ----NLGIYRQQKIARNKVIMRWLAHRGGALDLRDWMEKHPGEPFPVSVAFGADPATILG 227
               NLGIYR Q   R+  +MRWL HRGGA   + W   H  EP P +V  GADP TIL 
Sbjct: 180 EDAFNLGIYRMQVTGRDTALMRWLKHRGGAQHWQRWKRDH-AEPLPAAVVIGADPGTILA 238

Query: 228 AVTPVPDTLSEYAFAGLLRGSRTEVVKSISNDLEVPASAEIVLEGYIDPNEFADEGPYGD 287
           AVTPVPDTLSEY FAGLLRG + E+V  +S  L+VPA+AEIVLEG++  +E+ DEGPYGD
Sbjct: 239 AVTPVPDTLSEYQFAGLLRGRKVELVDCVSVPLKVPATAEIVLEGHVMLDEYGDEGPYGD 298

Query: 288 HTGYYNEVERHHVFTVTHVTMRNKPIYHSTYTGRPPDEPAVLGVALNEVFVPILQKQFPE 347
           HTGYYN VE   VF ++ +TMR  PIY ST+TGRPPDEP+VLG ALNEVF+P+L +QFPE
Sbjct: 299 HTGYYNAVESFPVFRISAITMRKDPIYLSTFTGRPPDEPSVLGEALNEVFIPLLTQQFPE 358

Query: 348 IADFYLPPEGCSYRMAIVTLKKQYPGHAKRVMLGVWSFLRQFMYTKFVIVCDEQVNARDW 407
           I DF+LPPEGCSYR+A+V+++K YPGHAKRVM+GVWSFLRQFMYTKFVIV D+ +NARDW
Sbjct: 359 IVDFWLPPEGCSYRIAVVSMRKAYPGHAKRVMMGVWSFLRQFMYTKFVIVVDDDINARDW 418

Query: 408 PQVIAAMVNHMSPLRDTLFIEHTPIDSLDFASPVVGLGSKIGLDATAKWPAE 459
             V+ A+   M P RD   +  TPID LDFASP  GLG KIGLDAT K   E
Sbjct: 419 KDVMWAISTRMDPARDITVVTGTPIDYLDFASPESGLGGKIGLDATDKMAPE 470



 Score = 85.5 bits (210), Expect = 5e-21
 Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 15/133 (11%)

Query: 495 PEAANDKLVLLLINKQEAGQAQQLLQRVVDKLNGDSPLKFVILCDDDVNIHDWNDVIWAM 554
           PE  + ++ ++ + K   G A++++  V   L      KFVI+ DDD+N  DW DV+WA+
Sbjct: 366 PEGCSYRIAVVSMRKAYPGHAKRVMMGVWSFLRQFMYTKFVIVVDDDINARDWKDVMWAI 425

Query: 555 TTRMDPARDSLRIVGQDL---------------ICFDATNKLPDEVEREWGTPIRKDPKL 599
           +TRMDPARD   + G  +               I  DAT+K+  E  REWG  +R   ++
Sbjct: 426 STRMDPARDITVVTGTPIDYLDFASPESGLGGKIGLDATDKMAPETHREWGRKLRMSDEI 485

Query: 600 VAKIDSLWDELGI 612
           +  +   W + G+
Sbjct: 486 IETVTRKWTDYGL 498