Pairwise Alignments

Query, 613 a.a., 4-hydroxy-3-polyprenylbenzoate decarboxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 512 a.a., UbiD family decarboxylase from Rhodopseudomonas palustris CGA009

 Score =  470 bits (1209), Expect = e-137
 Identities = 237/460 (51%), Positives = 306/460 (66%), Gaps = 10/460 (2%)

Query: 3   FKDLRDFLDYLEQRGELKRITHPIDPHYEMTEISDRTLRAKGPALLFENPLGYD-----F 57
           F DLR F  YLE RG+L RI  P+   +++TEI  R L A GPALL ENP+  D      
Sbjct: 9   FPDLRAFSGYLESRGQLHRIRKPVSVVHDLTEIHRRVLHAGGPALLIENPIKADGTPSEM 68

Query: 58  PVLTNLFGTPERVAMGMGRQQVQELRDVGQWLAYLKEPEPPRGLKELIEKLPVFKQVLNM 117
           P+L NLFGT ERVA G+G    + L  +G+ LA ++EP PP+ L + + KLP+ K  L M
Sbjct: 69  PILVNLFGTVERVAWGLGILP-ENLSRLGEALAEMREPAPPQSLTDALSKLPMAKAALAM 127

Query: 118 PVKRLRRAPCQEIVWQGDAVDLDKIPVMSCWPDDVAPLLTWGLTITRGPHKKR--QNLGI 175
             K  + AP QE+V  GDAVDL ++PV   WP + APL+TWGL  T+ P       N+G+
Sbjct: 128 RPKLAKSAPVQEVVLTGDAVDLGRLPVQIPWPGEPAPLITWGLVFTKPPPGAHGTDNVGV 187

Query: 176 YRQQKIARNKVIMRWLAHRGGALDLRDWMEKHPGEPFPVSVAFGADPATILGAVTPVPDT 235
           YR Q + ++++IMRWLAHRGGA     W  K      PV++  GADP+ IL AV P+P+T
Sbjct: 188 YRMQVLGKDRLIMRWLAHRGGAKHHHQW--KADKREMPVAIVIGADPSMILSAVLPLPET 245

Query: 236 LSEYAFAGLLRGSRTEVVKSISNDLEVPASAEIVLEGYIDPNEFADEGPYGDHTGYYNEV 295
           +SE  FAGLL G R  +    +  + VPA AEIVLEG++ P E A EGPYGDHTGYYN V
Sbjct: 246 VSEIKFAGLLGGERPSLTPCQTIPISVPADAEIVLEGFVSPTETAPEGPYGDHTGYYNAV 305

Query: 296 ERHHVFTVTHVTMRNKPIYHSTYTGRPPDEPAVLGVALNEVFVPILQKQFPEIADFYLPP 355
           E   V  +T +TMR  PIY STYTGRPPDEP+ LG A N+VF+P+ ++QFPEI D +LPP
Sbjct: 306 EEFPVMRITAITMRRHPIYLSTYTGRPPDEPSRLGEAFNDVFLPVARRQFPEIVDLWLPP 365

Query: 356 EGCSYRMAIVTLKKQYPGHAKRVMLGVWSFLRQFMYTKFVIVCDEQVNARDWPQVIAAMV 415
           E CSYR+A+ ++KK+YPG A+R+M+G+WS L QF YTK +I+ D+ V+ RDW  V+ A+ 
Sbjct: 366 EACSYRIAVASIKKRYPGQARRLMMGLWSMLPQFSYTKLLIIVDDDVDVRDWADVMWAVS 425

Query: 416 NHMSPLRDTLFIEHTPIDSLDFASPVVGLGSKIGLDATAK 455
                 RD + I  TPID LDFASP  GLG K+G+DAT K
Sbjct: 426 TRCDTSRDMVSISDTPIDYLDFASPKSGLGGKLGIDATNK 465



 Score = 92.0 bits (227), Expect = 5e-23
 Identities = 48/141 (34%), Positives = 81/141 (57%), Gaps = 16/141 (11%)

Query: 488 DVLDVALP-EAANDKLVLLLINKQEAGQAQQLLQRVVDKLNGDSPLKFVILCDDDVNIHD 546
           +++D+ LP EA + ++ +  I K+  GQA++L+  +   L   S  K +I+ DDDV++ D
Sbjct: 357 EIVDLWLPPEACSYRIAVASIKKRYPGQARRLMMGLWSMLPQFSYTKLLIIVDDDVDVRD 416

Query: 547 WNDVIWAMTTRMDPARDSLRIVGQDL---------------ICFDATNKLPDEVEREWGT 591
           W DV+WA++TR D +RD + I    +               +  DATNK+  E EREWG 
Sbjct: 417 WADVMWAVSTRCDTSRDMVSISDTPIDYLDFASPKSGLGGKLGIDATNKIGTETEREWGK 476

Query: 592 PIRKDPKLVAKIDSLWDELGI 612
            +  D  ++A++D++W  LG+
Sbjct: 477 VLEMDKDVIARVDAMWTSLGL 497