Pairwise Alignments

Query, 613 a.a., 4-hydroxy-3-polyprenylbenzoate decarboxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 493 a.a., UbiD family decarboxylase (RefSeq) from Shewanella loihica PV-4

 Score =  712 bits (1838), Expect = 0.0
 Identities = 330/459 (71%), Positives = 386/459 (84%)

Query: 1   MNFKDLRDFLDYLEQRGELKRITHPIDPHYEMTEISDRTLRAKGPALLFENPLGYDFPVL 60
           M+FKDLR F+D+LE  GELKRI HP+DPH EMTEI+DR LRAKGPALLFENP+G   PVL
Sbjct: 1   MSFKDLRSFIDHLEANGELKRIAHPVDPHLEMTEIADRVLRAKGPALLFENPVGKTMPVL 60

Query: 61  TNLFGTPERVAMGMGRQQVQELRDVGQWLAYLKEPEPPRGLKELIEKLPVFKQVLNMPVK 120
            NLFGTP+RVAM +G++    LRDVG+ LA+LKEPEPPRG K+ I K+P+FKQ LNMP K
Sbjct: 61  ANLFGTPKRVAMALGKEDPLALRDVGELLAFLKEPEPPRGFKDAISKIPMFKQALNMPPK 120

Query: 121 RLRRAPCQEIVWQGDAVDLDKIPVMSCWPDDVAPLLTWGLTITRGPHKKRQNLGIYRQQK 180
            +R APCQE+V  GD VDL K+P+  CWP DVAPL+TWGLTIT+GP +KRQNLGIYRQQ 
Sbjct: 121 TVRNAPCQEVVVSGDEVDLTKLPIQHCWPGDVAPLVTWGLTITKGPRQKRQNLGIYRQQL 180

Query: 181 IARNKVIMRWLAHRGGALDLRDWMEKHPGEPFPVSVAFGADPATILGAVTPVPDTLSEYA 240
           + +NK+IMRWL HRGGALD +D+ E+HPGE +PV VA GADP TILGAVTPVPD +SEYA
Sbjct: 181 LGKNKLIMRWLDHRGGALDFKDFKEQHPGERYPVVVALGADPVTILGAVTPVPDAMSEYA 240

Query: 241 FAGLLRGSRTEVVKSISNDLEVPASAEIVLEGYIDPNEFADEGPYGDHTGYYNEVERHHV 300
           FAGLLRG RTEV K++S DLEVPA++EI+LEGYI+P E A+EGPYGDHTGYYNE +   V
Sbjct: 241 FAGLLRGERTEVCKALSCDLEVPATSEIILEGYIEPGEMAEEGPYGDHTGYYNETDEFPV 300

Query: 301 FTVTHVTMRNKPIYHSTYTGRPPDEPAVLGVALNEVFVPILQKQFPEIADFYLPPEGCSY 360
           FTVTHV+ R   IYHSTYTGRPPDEPA+LGVALNEVFVPIL+KQ+PEI DFYLPPEGCSY
Sbjct: 301 FTVTHVSHRRDAIYHSTYTGRPPDEPAMLGVALNEVFVPILRKQYPEIVDFYLPPEGCSY 360

Query: 361 RMAIVTLKKQYPGHAKRVMLGVWSFLRQFMYTKFVIVCDEQVNARDWPQVIAAMVNHMSP 420
           RMA+++++KQYPGHAKRVM+G WSFLRQFMYTKF+I+ DE VN RDW  VI A+   M P
Sbjct: 361 RMAVISIRKQYPGHAKRVMMGAWSFLRQFMYTKFIIIVDEDVNCRDWNDVIWAITTRMDP 420

Query: 421 LRDTLFIEHTPIDSLDFASPVVGLGSKIGLDATAKWPAE 459
            RDT+ I++TPID LDFASPV GLGSK+G+DAT KW  E
Sbjct: 421 KRDTVMIDNTPIDYLDFASPVAGLGSKMGMDATNKWEGE 459



 Score =  103 bits (258), Expect = 1e-26
 Identities = 55/141 (39%), Positives = 81/141 (57%), Gaps = 16/141 (11%)

Query: 488 DVLDVALP-EAANDKLVLLLINKQEAGQAQQLLQRVVDKLNGDSPLKFVILCDDDVNIHD 546
           +++D  LP E  + ++ ++ I KQ  G A++++      L      KF+I+ D+DVN  D
Sbjct: 347 EIVDFYLPPEGCSYRMAVISIRKQYPGHAKRVMMGAWSFLRQFMYTKFIIIVDEDVNCRD 406

Query: 547 WNDVIWAMTTRMDPARDSLRIVGQDL---------------ICFDATNKLPDEVEREWGT 591
           WNDVIWA+TTRMDP RD++ I    +               +  DATNK   E +REWGT
Sbjct: 407 WNDVIWAITTRMDPKRDTVMIDNTPIDYLDFASPVAGLGSKMGMDATNKWEGETDREWGT 466

Query: 592 PIRKDPKLVAKIDSLWDELGI 612
           PI  D  +  +ID++WD+LGI
Sbjct: 467 PIVMDEAVKQRIDAIWDDLGI 487