Pairwise Alignments

Query, 613 a.a., 4-hydroxy-3-polyprenylbenzoate decarboxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 425 a.a., UbiD family decarboxylase from Methanococcus maripaludis JJ

 Score = 91.3 bits (225), Expect = 8e-23
 Identities = 89/330 (26%), Positives = 142/330 (43%), Gaps = 34/330 (10%)

Query: 138 DLDKI---PVMSCWPDDVAPLLTWGLTITRGPHKKRQNLGIYRQQKIARNKVIMRWLAHR 194
           DL+KI   P+ + +  D  P LT G+ I      K ++ G+        N  I R L   
Sbjct: 96  DLEKIHEYPIPTYYGKDAGPYLTSGVVIV-----KDKDEGV--------NASIHRILVRP 142

Query: 195 GGALDLRDWMEKH----------PGEPFPVSVAFGADPATILGAVTPVPDTLSEYAFAGL 244
            G L +R   ++H           GE    ++  G  PA +L A T    + +E  +A  
Sbjct: 143 DGNLAIRMVEQRHLHYIYNKNIGNGE-VDCAIVIGVHPAVLLAASTSGDVSFNELKYASA 201

Query: 245 LRGSRTEVVKSISNDLEVPASAEIVLEGYIDPNEFADEGPYGDHTGYYNEVERHHVFTVT 304
           L      +VK  + DLEVP  AE ++E  I   E  DEGP+ D TG Y+ + +  +  VT
Sbjct: 202 LMNKPLNLVKCKTVDLEVP-EAEFIIEAKITA-EMVDEGPFVDITGTYDVIRKQPLIKVT 259

Query: 305 HVTMRNKPIYHSTYTGRPPDEPAVLGVALNEVFVPILQKQFPEIADFYLPPEGCSYRMAI 364
            +  +   I+H+   G   +   ++G+         ++   P + +  L   GC +  A+
Sbjct: 260 ALRRKEDAIFHALLPG-GSEHKLLMGIPQEPRMYKGIRNTVPSLKNVALTQGGCCWLNAV 318

Query: 365 VTLKKQYPGHAKRVMLGVWSFLRQFMYTKFVIVCDEQVNARDWPQVIAAMVNHMSPLRDT 424
           V++ K+  G  K  +L     L      K V V D+ +N  D   V  A+   +   +D 
Sbjct: 319 VSIDKKTEGDGKNAILAA---LAAHPSLKHVTVVDDDINIYDANDVEYAVATRVQSDKDI 375

Query: 425 LFIEHTPIDSLD-FASPVVGLGSKIGLDAT 453
           + I      SLD  A     L +K+G+DAT
Sbjct: 376 IIIPGAKGSSLDPSADHKNKLTAKMGIDAT 405



 Score = 38.9 bits (89), Expect = 4e-07
 Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 3/63 (4%)

Query: 507 INKQEAGQAQQLLQRVVDKLNGDSPLKFVILCDDDVNIHDWNDVIWAMTTRMDPARDSLR 566
           I+K+  G  +     ++  L     LK V + DDD+NI+D NDV +A+ TR+   +D + 
Sbjct: 321 IDKKTEGDGKNA---ILAALAAHPSLKHVTVVDDDINIYDANDVEYAVATRVQSDKDIII 377

Query: 567 IVG 569
           I G
Sbjct: 378 IPG 380