Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho from Vibrio cholerae E7946 ATCC 55056

Subject, 451 a.a., Flagellum-specific ATP synthase FliI from Pseudomonas fluorescens FW300-N2E2

 Score = 71.2 bits (173), Expect = 6e-17
 Identities = 66/246 (26%), Positives = 119/246 (48%), Gaps = 16/246 (6%)

Query: 160 RVLDLAAPIGKGQRGLIVAPPKAGKTMLLQNIAQSIASNHPECVLMVL-LIDERPEEVTE 218
           R +D    +G+GQR  + A    GKT LL  IA+++     +C ++V  LI ER  E+ E
Sbjct: 159 RAIDGPLTLGEGQRVGLFAGAGCGKTTLLAEIARNV-----DCDVIVFGLIGERGRELRE 213

Query: 219 M-------QRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVVILLDSITRLA 271
                   +   +  +V +T D  +    + A      A+      + V++L+DS+TR A
Sbjct: 214 FLDHELDDELRARAVLVCATSDRSSMERARAAFTATALAEGFRARGQRVLLLIDSLTRFA 273

Query: 272 RAYNTVVPASGKVL-TGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVDTGSKMDEV 330
           RA   +  A+G+ L  GG+  +      R    A    E G++T   T L++  S M++ 
Sbjct: 274 RAQREIGLAAGEPLGRGGLPPSVYSLLPRLVERAGLTNE-GAITAFYTVLIEQDS-MNDP 331

Query: 331 IYEEFKGTGNMELHLNRKIAEKRVFPAIDFNRSGTRREELLTKTDELQKMWILRKIVHPM 390
           + +E +   +  + L+RK+AE+  +PAID   S +R    + + + L+    LR+++   
Sbjct: 332 VADEVRSLLDGHIVLSRKLAERGHYPAIDVLASLSRILANVAEAEHLRAGINLRRLLSAY 391

Query: 391 GETDAM 396
            + + M
Sbjct: 392 EQIELM 397