Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho from Vibrio cholerae E7946 ATCC 55056

Subject, 416 a.a., Flagellum-specific ATP synthase FliI from Pseudomonas fluorescens FW300-N2E2

 Score = 61.6 bits (148), Expect = 4e-14
 Identities = 68/229 (29%), Positives = 106/229 (46%), Gaps = 15/229 (6%)

Query: 160 RVLDLAAPIGKGQRGLIVAPPKAGKTMLLQNIAQSIASNHPECVLMVLLIDERPEEVTEM 219
           RV+D     G GQR  I A   +GKT L+  + +   +     V ++ LI ER  EVTE 
Sbjct: 128 RVIDGLLTCGVGQRIGIFAAAGSGKTTLINMLIEHTDAE----VFVIGLIGERGREVTEF 183

Query: 220 QRLVKGE-------VVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVVILLDSITRLAR 272
              ++         VV +T D  +      A      A+   +    VV+LLDS+TR AR
Sbjct: 184 IAHLRQSPKHSRCVVVFATSDFSSVDRCNSALQATTIAEYFRDQGWRVVLLLDSLTRYAR 243

Query: 273 AYNTVVPASGKV-LTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVDTGSKMDEVI 331
           A   +  A+G+     G  A+      R       V   GS+T   T L+++  + D  I
Sbjct: 244 ARRDLALAAGEAPARRGYPASVFDALPRLL-ERPGVTATGSITAWYTVLLESDDEPDP-I 301

Query: 332 YEEFKGTGNMELHLNRKIAEKRVFPAIDFNRSGTRREELLTKTDELQKM 380
            EE +   +  ++L+R +A K  +PAID  RS +R    +T T ++Q++
Sbjct: 302 AEEIRSILDGHVYLSRALAAKGHYPAIDVLRSVSRVATQVT-TPQVQQL 349