Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho from Vibrio cholerae E7946 ATCC 55056

Subject, 444 a.a., ATPase FliI/YscN family from Pseudomonas stutzeri RCH2

 Score = 67.4 bits (163), Expect = 8e-16
 Identities = 61/220 (27%), Positives = 103/220 (46%), Gaps = 14/220 (6%)

Query: 156 DITARVLDLAAPIGKGQRGLIVAPPKAGKTMLLQNIAQSIASNHPECVLMVLLIDERPEE 215
           D+  R ++    +GKGQR  + A    GK++LL  I +   ++    V++V LI ER  E
Sbjct: 147 DVGVRAINATLTLGKGQRVGLFAGSGVGKSVLLGMITRQTKAD----VVVVGLIGERGRE 202

Query: 216 VTEM-------QRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVVILLDSIT 268
           V E        + L K  VV +  +E     ++  E+    A    +   DV++L+DS+T
Sbjct: 203 VQEFLLHSLGEEGLKKAVVVVAPANESPLMRLKATELCHSIAAYFRDQGHDVLLLVDSLT 262

Query: 269 RLARAYNTVVPASGK-VLTGGVDANALHR-PKRFFGAARNVEEGGSLTIIATALVDTGSK 326
           R A A   +  A G+   T G   +     P+    A     + GSL+ I T L +   +
Sbjct: 263 RYAMAQREIALALGEPPATKGYPPSVFGMLPELVESAGNGASDNGSLSAIYTVLAEGDDQ 322

Query: 327 MDEVIYEEFKGTGNMELHLNRKIAEKRVFPAIDFNRSGTR 366
            D ++ +  +   +  + L+R++AE   +PAID   S +R
Sbjct: 323 QDPIV-DCARAILDGHIVLSRRLAEAGHYPAIDVCASVSR 361