Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., ATPase FliI/YscN from Pseudomonas syringae pv. syringae B728a

 Score = 78.6 bits (192), Expect = 4e-19
 Identities = 74/275 (26%), Positives = 130/275 (47%), Gaps = 21/275 (7%)

Query: 123 RPDNARNKILFENLTPLHANERMVMERGNGSTE-DITARVLDLAAPIGKGQRGLIVAPPK 181
           RP + R+ I  E+  P+       ++R   S   D+  R ++    +G+GQR  + A   
Sbjct: 119 RPLDGRSPIKAEDWVPMDGPTINPLKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTG 178

Query: 182 AGKTMLLQNIAQSIASNHPECVLMVLLIDERPEEVTEMQRLVKGE-------VVASTFDE 234
            GK++LL  + +   ++    +++V LI ER  EV E    + GE       VVAS  D+
Sbjct: 179 VGKSVLLGMMTRFTEAD----IIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADD 234

Query: 235 PASRHVQVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVVPASGKV-LTGGVDANA 293
                ++ A      A+   +  K+V++L+DS+TR A+A   +  A G+   T G   + 
Sbjct: 235 APLMRLRAAMYCTRIAEYFRDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSV 294

Query: 294 LHRPKRFFGAARNVEEGG-SLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLNRKIAEK 352
             R  +    A N E+GG S+T   T L + G    + I +  +G  +  + L+R++AE+
Sbjct: 295 FARLPKLVERAGNAEKGGGSITAFYTVLSE-GDDQQDPIADSARGVLDGHIVLSRRLAEE 353

Query: 353 RVFPAIDFNRSGTR------REELLTKTDELQKMW 381
             +PAID   S +R        E + +    +++W
Sbjct: 354 GHYPAIDIEASISRVMPAVVSPEHMARAQHFKQLW 388