Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., type III secretion cytoplasmic ATPase HrcN from Pseudomonas syringae pv. syringae B728a

 Score = 75.1 bits (183), Expect = 4e-18
 Identities = 66/216 (30%), Positives = 111/216 (51%), Gaps = 16/216 (7%)

Query: 160 RVLDLAAPIGKGQRGLIVAPPKAGKTMLLQNIAQSIASNHPECVLMVL-LIDERPEEVTE 218
           R +D A  +G+GQR  + A    GKT L+  +A+++     +C ++V  LI ER  E+ E
Sbjct: 157 RAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNM-----DCDVIVFGLIGERGRELRE 211

Query: 219 M------QRLVKGEV-VASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVVILLDSITRLA 271
                  + L +  V V +T D  +    + A      A+      + V++LLDS+TR A
Sbjct: 212 FLDHELDETLRRRSVLVCATSDRSSMERARAAFTATAIAEAFRARGQKVLLLLDSLTRFA 271

Query: 272 RAYNTVVPASGKVL-TGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVDTGSKMDEV 330
           RA   +  ASG+ L  GG+  +      R    A  + E GS+T + T L++  S M++ 
Sbjct: 272 RAQREIGIASGEPLGRGGLPPSVYTLLPRLVERA-GMSENGSITALYTVLIEQDS-MNDP 329

Query: 331 IYEEFKGTGNMELHLNRKIAEKRVFPAIDFNRSGTR 366
           + +E +   +  + L+RK+AE+  +PAID + S +R
Sbjct: 330 VADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISR 365