Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho from Vibrio cholerae E7946 ATCC 55056

Subject, 467 a.a., flagellum-specific ATP synthase from Sinorhizobium meliloti 1021

 Score = 70.9 bits (172), Expect = 8e-17
 Identities = 66/246 (26%), Positives = 117/246 (47%), Gaps = 21/246 (8%)

Query: 160 RVLDLAAPIGKGQRGLIVAPPKAGKTMLLQNIAQSIASNHPECVLMVLLIDERPEEVTEM 219
           R +D+ +P+  GQR  I A    GK+ LL  +A++ A +     +++ L+ ER  EV E 
Sbjct: 162 RAIDIFSPLCLGQRLGIFAGSGVGKSTLLSMLARADAFDK----VVIALVGERGREVREF 217

Query: 220 ------QRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKD----VVILLDSITR 269
                   L K   V +T DE       + +M    A  + EH +D    V++++DS+TR
Sbjct: 218 IEDTLGDNLSKSVAVVATSDESP----MLRKMAPLTAVTIAEHYRDKGDNVLLIVDSVTR 273

Query: 270 LARAYNTVVPASGK-VLTGGVDANAL-HRPKRFFGAARNVEEGGSLTIIATALVDTGSKM 327
            A A   V  A+G+  +  G  A+     P+    A    E  G++T I + LVD G   
Sbjct: 274 FAHAIREVATAAGEPPIARGYPASVFTELPRLLERAGPGAEGAGTITAIISILVD-GDNH 332

Query: 328 DEVIYEEFKGTGNMELHLNRKIAEKRVFPAIDFNRSGTRREELLTKTDELQKMWILRKIV 387
           ++ + +  +G  +  + L+R +AE+  +P ++   S +R        D+ + +  L+ ++
Sbjct: 333 NDPVADSARGILDGHIVLDRSLAEEGRYPPVNPLASISRLARKAWTPDQEKLVARLKSLI 392

Query: 388 HPMGET 393
           H   ET
Sbjct: 393 HRFEET 398