Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho from Vibrio cholerae E7946 ATCC 55056

Subject, 421 a.a., transcription termination factor Rho from Sinorhizobium meliloti 1021

 Score =  597 bits (1539), Expect = e-175
 Identities = 294/416 (70%), Positives = 360/416 (86%)

Query: 1   MNLTELKNTPVSDLVKLGESLGLENLARLRKQDIIFAILKAHAKSGEDIFGDGVLEILQD 60
           M L ELKN   +DL+   E L +EN + +RKQ+++FAILK  A+   +I G+GV+E+LQD
Sbjct: 4   MKLQELKNKTPTDLLAFAEELEVENASTMRKQELMFAILKMLAQQEIEIIGEGVVEVLQD 63

Query: 61  GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDSIAGKIRPPKEGERYFALLKVNTVN 120
           GFGFLRSA+++YL GPDDIY+SPSQIRRF+L+TGD++ G IR PKEGERYFALLKVNT+N
Sbjct: 64  GFGFLRSANANYLPGPDDIYISPSQIRRFSLKTGDTVEGPIRGPKEGERYFALLKVNTIN 123

Query: 121 DDRPDNARNKILFENLTPLHANERMVMERGNGSTEDITARVLDLAAPIGKGQRGLIVAPP 180
            D P+  R+K+ F+NLTPL+ NER  ME    +++D++ARV+DL AP+GKGQRGLIVAPP
Sbjct: 124 FDDPEKIRHKVHFDNLTPLYPNERFKMELEVPTSKDLSARVIDLVAPLGKGQRGLIVAPP 183

Query: 181 KAGKTMLLQNIAQSIASNHPECVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV 240
           + GKT+LLQNIA SI +NHPEC L+VLLIDERPEEVT+MQR VKGEVV+STFDEPA+RHV
Sbjct: 184 RTGKTVLLQNIAHSITANHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPATRHV 243

Query: 241 QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF 300
           QVAEMVIEKAKRLVEH +DVVILLDS+TRL RAYNTVVP+SGKVLTGGVDANAL RPKRF
Sbjct: 244 QVAEMVIEKAKRLVEHGRDVVILLDSVTRLGRAYNTVVPSSGKVLTGGVDANALQRPKRF 303

Query: 301 FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLNRKIAEKRVFPAIDF 360
           FGAARN+EEGGSLTIIATAL+DTGS+MDEVI+EEFKGTGN E+ L+RK+A+KR+FPA+D 
Sbjct: 304 FGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPAMDI 363

Query: 361 NRSGTRREELLTKTDELQKMWILRKIVHPMGETDAMEFLIDKLAMTKTNDEFFDAM 416
            +SGTR+E+LL    +LQK+++LR+I+ PMG TDA+EFLIDKL  TKTN +FFD+M
Sbjct: 364 LKSGTRKEDLLVPRQDLQKIFVLRRILAPMGTTDAIEFLIDKLKQTKTNGDFFDSM 419