Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., flagellum-specific ATP synthase (RefSeq) from Shewanella amazonensis SB2B

 Score = 65.1 bits (157), Expect = 4e-15
 Identities = 61/234 (26%), Positives = 108/234 (46%), Gaps = 14/234 (5%)

Query: 156 DITARVLDLAAPIGKGQRGLIVAPPKAGKTMLLQNIAQSIASNHPECVLMVLLIDERPEE 215
           D+  R ++    +GKGQR  + A    GK++LL  + +   ++    V++V L+ ER  E
Sbjct: 148 DVGIRAINAMLTVGKGQRMGLFAGSGVGKSVLLGMMTRGTTAD----VIVVGLVGERGRE 203

Query: 216 VTEMQRLV---KGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKD----VVILLDSIT 268
           V E    +   +G   +     PA     +     E + R+ E+ +D    V++L+DS+T
Sbjct: 204 VKEFIEEILGPEGRARSVVVAAPADTSPLMRLRACETSTRIAEYFRDLGFNVLLLMDSLT 263

Query: 269 RLARAYNTVVPASGK-VLTGGVDANALHRPKRFFGAARNVEEG-GSLTIIATALVDTGSK 326
           R A+A   +  A G+   T G   +   +  R    A N   G GS+T   T L + G  
Sbjct: 264 RYAQAQREIALAVGEPPATKGYPPSVFAKLPRLVERAGNGGPGQGSITAFYTVLTE-GDD 322

Query: 327 MDEVIYEEFKGTGNMELHLNRKIAEKRVFPAIDFNRSGTRREELLTKTDELQKM 380
           + + I +  +   +  + L+R +A+   +PAID   S +R   ++     L+ M
Sbjct: 323 LQDPIADAARAILDGHIVLSRTLADSGHYPAIDIEASISRVAPMVISPAHLEAM 376